RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 MUC1P15941 1255 aaPredicted RBP2.44□□□□□ -2.02
SNHG1-222ENST00000545308 FKBP2P26885 142 aaKnown RBP2.44□□□□□ -2.02
SNHG1-222ENST00000545308 PSMB9P28065 219 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 CD40LGP29965 261 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 TGFBR1P36897 503 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 SSR2P43308 183 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 RAP1GDS1P52306 607 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 SLC18A1P54219 525 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 PLTPP55058 493 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 UBA52P62987 128 aaKnown RBP2.44□□□□□ -2.02
SNHG1-222ENST00000545308 REEP5Q00765 189 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 MEF2CQ06413 473 aaPredicted RBP2.44□□□□□ -2.02
SNHG1-222ENST00000545308 PLCXD2Q0VAA5 305 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 EBI3Q14213 229 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 TAF9Q16594 264 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 SP6Q3SY56 376 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 CDKL4Q5MAI5 379 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 CLEC12AQ5QGZ9 265 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 FAM71E1Q6IPT2 247 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 FAM231DQ6ZW35 169 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 SSX7Q7RTT5 188 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 PAGE2Q7Z2X7 111 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 PDPNQ86YL7 162 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 OR2Z1Q8NG97 314 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 OR8K1Q8NGG5 319 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 OR9A2Q8NGT5 310 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 FNDC9Q8TBE3 224 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 EEF1AKMT1Q8WVE0 214 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 WDR34Q96EX3 536 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 PGLYRP3Q96LB9 341 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 DERL3Q96Q80 235 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 HBEGFQ99075 208 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 MARVELD1Q9BSK0 173 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 DCUN1D5Q9BTE7 237 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 MS4A8Q9BY19 250 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 CXorf21Q9HAI6 301 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 PARP11Q9NR21 331 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 TAS2R9Q9NYW1 312 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 RAB22AQ9UL26 194 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 SLC22A14Q9Y267 594 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 INSIG2Q9Y5U4 225 aa2.44□□□□□ -2.02
SNHG1-222ENST00000545308 IGHV1-3A0A0C4DH29 117 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 MIF4GDA9UHW6 222 aaKnown RBP2.43□□□□□ -2.02
SNHG1-222ENST00000545308 GOLGA6L19H0YKK7 550 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 GPR171O14626 319 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 ITGB1BP1O14713 200 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 UBDO15205 165 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 RGS5O15539 181 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 ADAP1O75689 374 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 MPZL1O95297 269 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 MAS1P04201 325 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 PVALBP20472 110 aaPredicted RBP2.43□□□□□ -2.02
SNHG1-222ENST00000545308 EVX1P49640 407 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 KRTAP10-1P60331 282 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 ZNF816Q0VGE8 651 aaPredicted RBP2.43□□□□□ -2.02
SNHG1-222ENST00000545308 BAMBIQ13145 260 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 SPA17Q15506 151 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 MOGQ16653 247 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 ABCA11PQ4W5N1 156 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 KLHL12Q53G59 568 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 FAM222AQ5U5X8 452 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 MORN3Q6PF18 240 aaPredicted RBP2.43□□□□□ -2.02
SNHG1-222ENST00000545308 C10orf107Q8IVU9 208 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 SLC35G3Q8N808 338 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 ZNF615Q8N8J6 731 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 SPANXA2-OT1Q8N9U9 137 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 FAM45AQ8TCE6 357 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 DYNC2LI1Q8TCX1 351 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.43□□□□□ -2.026e-13■■□□□ 14.1
SNHG1-222ENST00000545308 POP5Q969H6 163 aaKnown RBP2.43□□□□□ -2.02
SNHG1-222ENST00000545308 MRAP2Q96G30 205 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 FAM210AQ96ND0 272 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 DOK1Q99704 481 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 C7orf50Q9BRJ6 194 aaKnown RBP2.43□□□□□ -2.02
SNHG1-222ENST00000545308 BPESC1Q9GZL8 116 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 HDHD2Q9H0R4 259 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 C1orf109Q9NX04 203 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 EMC3Q9P0I2 261 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 FBXL3Q9UKT7 428 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 ZNF780BQ9Y6R6 833 aa2.43□□□□□ -2.02
SNHG1-222ENST00000545308 IGKV2D-24A0A075B6R9 120 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 CLPSL1A2RUU4 121 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 C3orf84H3BNL1 204 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 LGALS9O00182 355 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 UPK2O00526 184 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 MAGEB4O15481 346 aaPredicted RBP2.42□□□□□ -2.02
SNHG1-222ENST00000545308 GYG2O15488 501 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 UGT2B11O75310 529 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 STK16O75716 305 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 OR2A4O95047 310 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 SEC11BP0C7V7 166 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 MLNP12872 115 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 NPY1RP25929 384 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 AGTR1P30556 359 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 MPIP34949 423 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 PITPNAQ00169 270 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 BNIP2Q12982 314 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 SSX1Q16384 188 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 ATP6AP1LQ52LC2 224 aa2.42□□□□□ -2.02
SNHG1-222ENST00000545308 KHDRBS2Q5VWX1 349 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms