RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 TEX22C9J3V5 150 aa9.09□□□□□ -0.95
HDAC4-216ENST00000544989 UPK2O00526 184 aa9.09□□□□□ -0.95
HDAC4-216ENST00000544989 RLN1P04808 185 aa9.09□□□□□ -0.95
HDAC4-216ENST00000544989 CRYGCP07315 174 aa9.09□□□□□ -0.95
HDAC4-216ENST00000544989 APELAP0DMC3 54 aa9.09□□□□□ -0.95
HDAC4-216ENST00000544989 RPEL1Q2QD12 228 aa9.09□□□□□ -0.95
HDAC4-216ENST00000544989 RNASE10Q5GAN6 216 aaKnown RBP9.09□□□□□ -0.95
HDAC4-216ENST00000544989 ZNF486Q96H40 463 aaPredicted RBP9.09□□□□□ -0.95
HDAC4-216ENST00000544989 FYTTD1Q96QD9 318 aaKnown RBP9.09□□□□□ -0.95
HDAC4-216ENST00000544989 GPHA2Q96T91 129 aa9.09□□□□□ -0.95
HDAC4-216ENST00000544989 TSC22D3Q99576 134 aa9.09□□□□□ -0.95
HDAC4-216ENST00000544989 RSRP1Q9BUV0 290 aa9.09□□□□□ -0.95
HDAC4-216ENST00000544989 FXYD6Q9H0Q3 95 aa9.09□□□□□ -0.95
HDAC4-216ENST00000544989 TMEM140Q9NV12 185 aa9.09□□□□□ -0.95
HDAC4-216ENST00000544989 FKBP11Q9NYL4 201 aa9.09□□□□□ -0.95
HDAC4-216ENST00000544989 MTFP1Q9UDX5 166 aa9.09□□□□□ -0.95
HDAC4-216ENST00000544989 BIRC6Q9NR09 4857 aa9.09□□□□□ -0.95
HDAC4-216ENST00000544989 SORL1Q92673 2214 aa9.08□□□□□ -0.96
HDAC4-216ENST00000544989 ANKRD34BA5PLL1 514 aa9.08□□□□□ -0.96
HDAC4-216ENST00000544989 GABARAPH6UMI1 98 aa9.08□□□□□ -0.96
HDAC4-216ENST00000544989 S1PR2O95136 353 aa9.08□□□□□ -0.96
HDAC4-216ENST00000544989 IL6RP08887 468 aaPredicted RBP9.08□□□□□ -0.96
HDAC4-216ENST00000544989 DEFA4P12838 97 aa9.08□□□□□ -0.96
HDAC4-216ENST00000544989 PSMB6P28072 239 aa9.08□□□□□ -0.96
HDAC4-216ENST00000544989 TAS2R19P59542 299 aa9.08□□□□□ -0.96
HDAC4-216ENST00000544989 EXOSC2Q13868 293 aaKnown RBP9.08□□□□□ -0.96
HDAC4-216ENST00000544989 KLF5Q13887 457 aaPredicted RBP9.08□□□□□ -0.96
HDAC4-216ENST00000544989 SPCS2Q15005 226 aa9.08□□□□□ -0.96
HDAC4-216ENST00000544989 KLK9Q2XQG4 91 aa9.08□□□□□ -0.96
HDAC4-216ENST00000544989 C10orf55Q5SWW7 151 aa9.08□□□□□ -0.96
HDAC4-216ENST00000544989 QTRT1Q9BXR0 403 aaKnown RBP9.08□□□□□ -0.96
HDAC4-216ENST00000544989 AKIP1Q9NQ31 210 aa9.08□□□□□ -0.96
HDAC4-216ENST00000544989 THYN1Q9P016 225 aa9.08□□□□□ -0.96
HDAC4-216ENST00000544989 PEMTQ9UBM1 199 aa9.08□□□□□ -0.96
HDAC4-216ENST00000544989 KLK9Q9UKQ9 250 aa9.08□□□□□ -0.96
HDAC4-216ENST00000544989 EPPK1P58107 5090 aaKnown RBP9.07□□□□□ -0.96
HDAC4-216ENST00000544989 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.07□□□□□ -0.96
HDAC4-216ENST00000544989 HMX3A6NHT5 357 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 B3GALNT1O75752 331 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 SNAPC5O75971 98 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 ATG12O94817 140 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 LY86O95711 162 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 RPA2P15927 270 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 CTRB1P17538 263 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 PTBP1P26599 531 aaKnown RBP eCLIP9.07□□□□□ -0.965e-7■■■■□ 21
HDAC4-216ENST00000544989 LPAR6P43657 344 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 OR2B8PP59922 312 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 RND3P61587 244 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 CD69Q07108 199 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 MEF2DQ14814 521 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 C15orf32Q32M92 178 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 CTRB2Q6GPI1 263 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 TMEM229BQ8NBD8 167 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 OR9G4Q8NGQ1 327 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 OR1L8Q8NGR8 309 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 OR52I2Q8NH67 350 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 ZFAND1Q8TCF1 268 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 DYNC2LI1Q8TCX1 351 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 CXorf58Q96LI9 332 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 B9D2Q9BPU9 175 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 SIGLEC8Q9NYZ4 499 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 KLK11Q9UBX7 282 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 PRNDQ9UKY0 176 aa9.07□□□□□ -0.96
HDAC4-216ENST00000544989 CTDSPLO15194 276 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 CD74P04233 296 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 CD3DP04234 171 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 SERPINE2P07093 398 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 TRAPPC2P0DI81 140 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 TRAPPC2BP0DI82 140 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 PGAM2P15259 253 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 ZNF45Q02386 682 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 PHLDA2Q53GA4 152 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 LAX1Q8IWV1 398 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 OR1L6Q8NGR2 347 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 OR5B3Q8NH48 314 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 EEF1AKMT3Q96AZ1 226 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 DIRAS2Q96HU8 199 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 ABHD1Q96SE0 405 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 RSL24D1Q9UHA3 163 aaKnown RBP9.06□□□□□ -0.96
HDAC4-216ENST00000544989 FBXL7Q9UJT9 491 aa9.06□□□□□ -0.96
HDAC4-216ENST00000544989 TRBV7-1A0A0A6YYK4 115 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 H0Y980 276 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 M0QYG6 137 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 CTDSP2O14595 271 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 OR2J3O76001 311 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 RAB3DO95716 219 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 KRASP01116 189 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 PRH1P02810 166 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 NHLRC4P0CG21 123 aaPredicted RBP9.05□□□□□ -0.96
HDAC4-216ENST00000544989 AREGP15514 252 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 SYNJ2BPP57105 145 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 IL18Q14116 193 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 TBC1D26Q86UD7 250 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 LHFPL1Q86WI0 220 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 CCDC71LQ8N9Z2 235 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 TERB2Q8NHR7 220 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 SMIM4Q8WVI0 70 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 LSM10Q969L4 123 aaKnown RBP9.05□□□□□ -0.96
HDAC4-216ENST00000544989 ISOC1Q96CN7 298 aa9.05□□□□□ -0.96
HDAC4-216ENST00000544989 TMEM56Q96MV1 263 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms