RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 PPP1R27Q86WC6 154 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 Q8N6K4 173 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 OR2T35Q8NGX2 323 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 OR5B3Q8NH48 314 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 OR52E5Q8NH55 327 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 THAP6Q8TBB0 222 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 C17orf50Q8WW18 174 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 SSMEM1Q8WWF3 244 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 ST6GAL2Q96JF0 529 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 OR10C1Q96KK4 312 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 NEURL2Q9BR09 285 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 COMMD5Q9GZQ3 224 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 PRDM13Q9H4Q3 707 aa7.61□□□□□ -1.19
YBX3-215ENST00000544504 RANGRFQ9HD47 186 aaPredicted RBP7.61□□□□□ -1.19
YBX3-215ENST00000544504 FOXA2Q9Y261 457 aaPredicted RBP7.61□□□□□ -1.19
YBX3-215ENST00000544504 CMYA5Q8N3K9 4069 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 A0A0G2JRQ6 117 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 NCBP2LA6PVI3 153 aaKnown RBP7.6□□□□□ -1.19
YBX3-215ENST00000544504 SRRM4A7MD48 611 aaKnown RBP7.6□□□□□ -1.19
YBX3-215ENST00000544504 FGF16O43320 207 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 PITX3O75364 302 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 OR2F2O95006 317 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 SCAF4O95104 1147 aaKnown RBP7.6□□□□□ -1.19
YBX3-215ENST00000544504 IGLV2-23P01705 113 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 HSPE1P61604 102 aaKnown RBP7.6□□□□□ -1.19
YBX3-215ENST00000544504 RELBQ01201 579 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 ID3Q02535 119 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 HNF4GQ14541 408 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 C5orf64Q2M2E5 130 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 DEFB112Q30KQ8 113 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 HIST2H2BDQ6DRA6 164 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 HSD17B13Q7Z5P4 300 aaPredicted RBP7.6□□□□□ -1.19
YBX3-215ENST00000544504 VKORC1L1Q8N0U8 176 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 TMEM86BQ8N661 226 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 OR4D5Q8NGN0 318 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 OR1L8Q8NGR8 309 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 PPP1R1CQ8WVI7 109 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 CIB3Q96Q77 187 aaPredicted RBP7.6□□□□□ -1.19
YBX3-215ENST00000544504 RAB40CQ96S21 281 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 RASL11BQ9BPW5 248 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 ENY2Q9NPA8 101 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 TMEM14BQ9NUH8 114 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 METTL1Q9UBP6 276 aaKnown RBP7.6□□□□□ -1.19
YBX3-215ENST00000544504 HSPB7Q9UBY9 170 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 TCF19Q9Y242 345 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 SIGLEC9Q9Y336 463 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 MOB4Q9Y3A3 225 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 POMT1Q9Y6A1 747 aa7.6□□□□□ -1.19
YBX3-215ENST00000544504 MPTX1A8MV57 137 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 H3BUX3 64 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 L7N2F9 121 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 GPR137BO60478 399 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 MPC2O95563 127 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 SCGB1D2O95969 90 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 IFNA17P01571 189 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 C1QBP02746 253 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 CRYGBP07316 175 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 OR9G9P0C7N8 305 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 NUP62P37198 522 aaPredicted RBP7.59□□□□□ -1.19
YBX3-215ENST00000544504 F2RL1P55085 397 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 TAS2R30P59541 319 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 S100A10P60903 97 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 VAMP2P63027 116 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 RPP30P78346 268 aaKnown RBP7.59□□□□□ -1.19
YBX3-215ENST00000544504 TNFRSF9Q07011 255 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 IL15RAQ13261 267 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 PRSS8Q16651 343 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 ZFP69Q49AA0 526 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 PRSS54Q6PEW0 395 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 Q6YL49 198 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 Q6ZRM9 215 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 HYLS1Q96M11 299 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 RBM14Q96PK6 669 aaKnown RBP7.59□□□□□ -1.19
YBX3-215ENST00000544504 SRSF8Q9BRL6 282 aaKnown RBP7.59□□□□□ -1.19
YBX3-215ENST00000544504 SLC25A33Q9BSK2 321 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 OR51B2Q9Y5P1 312 aa7.59□□□□□ -1.19
YBX3-215ENST00000544504 A0A1W2PN81 502 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 A6NDX4 124 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 CEBPZOSA8MTT3 80 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 E5RGE8 158 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 SYNGR2O43760 224 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 DEDDO75618 318 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 TSPAN9O75954 239 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 HLA-DRB1P01911 266 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 MBPP02686 304 aaPredicted RBP7.58□□□□□ -1.2
YBX3-215ENST00000544504 SLC25A4P12235 298 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 CD24P25063 80 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 CHRNA7P36544 502 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 IER3P46695 156 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 ATP5IP56385 69 aaPredicted RBP7.58□□□□□ -1.2
YBX3-215ENST00000544504 OR2B8PP59922 312 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 RPL23AP62750 156 aaKnown RBP7.58□□□□□ -1.2
YBX3-215ENST00000544504 RAB32Q13637 225 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 C11orf87Q6NUJ2 197 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 SHISA2Q6UWI4 295 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 TREML4Q6UXN2 200 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 NOXA1Q86UR1 476 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 ZNF418Q8TF45 676 aaPredicted RBP7.58□□□□□ -1.2
YBX3-215ENST00000544504 HIPK2Q9H2X6 1198 aa7.58□□□□□ -1.2
YBX3-215ENST00000544504 FBXL15Q9H469 300 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms