RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 A8MZ25 164 aa9.95□□□□□ -0.82
TNFRSF1A-215ENST00000543359 PGLYRP1O75594 196 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-215ENST00000543359 S1PR2O95136 353 aa9.95□□□□□ -0.82
TNFRSF1A-215ENST00000543359 CATR1Q13166 79 aa9.95□□□□□ -0.82
TNFRSF1A-215ENST00000543359 RPEL1Q2QD12 228 aa9.95□□□□□ -0.82
TNFRSF1A-215ENST00000543359 ZNF585BQ52M93 769 aa9.95□□□□□ -0.82
TNFRSF1A-215ENST00000543359 OR51H1Q8NH63 302 aa9.95□□□□□ -0.82
TNFRSF1A-215ENST00000543359 AIFM2Q9BRQ8 373 aa9.95□□□□□ -0.82
TNFRSF1A-215ENST00000543359 RSRP1Q9BUV0 290 aa9.95□□□□□ -0.82
TNFRSF1A-215ENST00000543359 FXYD6Q9H0Q3 95 aa9.95□□□□□ -0.82
TNFRSF1A-215ENST00000543359 C19orf73Q9NVV2 129 aa9.95□□□□□ -0.82
TNFRSF1A-215ENST00000543359 FBXL7Q9UJT9 491 aa9.95□□□□□ -0.82
TNFRSF1A-215ENST00000543359 IGLV11-55A0A075B6I3 123 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 IGLC7A0M8Q6 106 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 PPP5D1E7EU14 171 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 HPGDSO60760 199 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 GABARAPO95166 117 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 FGF2P09038 288 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 F2RP25116 425 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 HLA-DMAP28067 261 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 HRH1P35367 487 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 TAS2R46P59540 309 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 HERV-K104P61576 105 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 AADACL3Q5VUY0 350 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 CADM3Q8N126 398 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 OR5H2Q8NGV7 314 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 CD300LFQ8TDQ1 290 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 CCDC140Q96MF4 163 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 SCPEP1Q9HB40 452 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 TMEM140Q9NV12 185 aa9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 PLECQ15149 4684 aaKnown RBP9.94□□□□□ -0.82
TNFRSF1A-215ENST00000543359 OR2C1O95371 312 aa9.93□□□□□ -0.82
TNFRSF1A-215ENST00000543359 HLA-AP01891 365 aaKnown RBP9.93□□□□□ -0.82
TNFRSF1A-215ENST00000543359 RLN1P04808 185 aa9.93□□□□□ -0.82
TNFRSF1A-215ENST00000543359 REG1AP05451 166 aa9.93□□□□□ -0.82
TNFRSF1A-215ENST00000543359 IGHV4-30-4P0DP06 118 aa9.93□□□□□ -0.82
TNFRSF1A-215ENST00000543359 EDN2P20800 178 aa9.93□□□□□ -0.82
TNFRSF1A-215ENST00000543359 RORCP51449 518 aa9.93□□□□□ -0.82
TNFRSF1A-215ENST00000543359 TATDN3Q17R31 274 aa9.93□□□□□ -0.82
TNFRSF1A-215ENST00000543359 OR6F1Q8NGZ6 308 aa9.93□□□□□ -0.82
TNFRSF1A-215ENST00000543359 FCAMRQ8WWV6 532 aa9.93□□□□□ -0.82
TNFRSF1A-215ENST00000543359 BORCS5Q969J3 196 aa9.93□□□□□ -0.82
TNFRSF1A-215ENST00000543359 HRASLSQ9HDD0 168 aa9.93□□□□□ -0.82
TNFRSF1A-215ENST00000543359 COMMD9Q9P000 198 aa9.93□□□□□ -0.82
TNFRSF1A-215ENST00000543359 TEX50A0A1B0GTY4 177 aa9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 SMIM31A0A1B0GVY4 71 aa9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 DPPA5A6NC42 116 aa9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 H0Y980 276 aa9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 GPR31O00270 319 aa9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 IGHV3-23P01764 117 aa9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 RPA2P15927 270 aa9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 LPAR6P43657 344 aa9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 FAM209BQ5JX69 171 aa9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 GPHB5Q86YW7 130 aa9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 SNX29P2Q8IUI4 249 aa9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 OR10W1Q8NGF6 305 aa9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 DGCR14Q96DF8 476 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 SRSF8Q9BRL6 282 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 TM2D3Q9BRN9 247 aa9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 S4R3C0 116 aa9.92□□□□□ -0.82
TNFRSF1A-215ENST00000543359 MFSD2BA6NFX1 497 aa9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 MARCH11A6NNE9 402 aa9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 ZNF785A8K8V0 405 aa9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 LGALS9O00182 355 aa9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 GGCTO75223 188 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 HIST1H1BP16401 226 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 ALDH3B2P48448 385 aa9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 WT1-ASQ06250 92 aa9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 DEFB114Q30KQ6 69 aa9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 CD300EQ496F6 205 aaPredicted RBP9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 CLEC19AQ6UXS0 136 aa9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 Q8N402 240 aa9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 DMBX1Q8NFW5 382 aa9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 RCHY1Q96PM5 261 aa9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 QTRT1Q9BXR0 403 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 COMMD5Q9GZQ3 224 aa9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 NDUFA4L2Q9NRX3 87 aa9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 PEMTQ9UBM1 199 aa9.91□□□□□ -0.82
TNFRSF1A-215ENST00000543359 C2orf70A6NJV1 201 aa9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 DBX1A6NMT0 343 aa9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 DHFRP00374 187 aa9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 KRASP01116 189 aa9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 IGKV1-39P01597 117 aa9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 IGKV1D-39P04432 117 aa9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 ZNF182P17025 639 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 RCVRNP35243 200 aa9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 MFAP2P55001 183 aa9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 UCP3P55916 312 aa9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 GPR107Q5VW38 600 aa9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 CMTM1Q8IZ96 169 aa9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 OR2K2Q8NGT1 345 aa9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 ZNF502Q8TBZ5 544 aa9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 ABHD1Q96SE0 405 aa9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 FAM212BQ9NTI7 297 aaPredicted RBP9.9□□□□□ -0.82
TNFRSF1A-215ENST00000543359 TMEM213A2RRL7 107 aa9.89□□□□□ -0.83
TNFRSF1A-215ENST00000543359 CLEC3BP05452 202 aa9.89□□□□□ -0.83
TNFRSF1A-215ENST00000543359 SERPINE2P07093 398 aa9.89□□□□□ -0.83
TNFRSF1A-215ENST00000543359 TRAPPC2P0DI81 140 aa9.89□□□□□ -0.83
TNFRSF1A-215ENST00000543359 TRAPPC2BP0DI82 140 aa9.89□□□□□ -0.83
TNFRSF1A-215ENST00000543359 DEFA4P12838 97 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms