RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 CTRB2Q6GPI1 263 aa9.93□□□□□ -0.82
RTN3-212ENST00000543123 THOC7Q6I9Y2 204 aaKnown RBP9.93□□□□□ -0.82
RTN3-212ENST00000543123 SLC16A13Q7RTY0 426 aa9.93□□□□□ -0.82
RTN3-212ENST00000543123 GVQW1Q8N7I0 195 aa9.93□□□□□ -0.82
RTN3-212ENST00000543123 OR5AP2Q8NGF4 316 aa9.93□□□□□ -0.82
RTN3-212ENST00000543123 OR5H6Q8NGV6 325 aa9.93□□□□□ -0.82
RTN3-212ENST00000543123 IL17DQ8TAD2 202 aa9.93□□□□□ -0.82
RTN3-212ENST00000543123 GIMAP1Q8WWP7 306 aa9.93□□□□□ -0.82
RTN3-212ENST00000543123 S100A16Q96FQ6 103 aaKnown RBP9.93□□□□□ -0.82
RTN3-212ENST00000543123 PLEKHA3Q9HB20 300 aa9.93□□□□□ -0.82
RTN3-212ENST00000543123 VCX3AQ9NNX9 186 aa9.93□□□□□ -0.82
RTN3-212ENST00000543123 ZC4H2Q9NQZ6 224 aa9.93□□□□□ -0.82
RTN3-212ENST00000543123 KLK9Q9UKQ9 250 aa9.93□□□□□ -0.82
RTN3-212ENST00000543123 RYR2Q92736 4967 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 ZNF320A2RRD8 509 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 A8MWP6 167 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 SULT1C2O00338 296 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 OR2C1O95371 312 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 BRWD1-AS2P59051 145 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 ERVK-16P61578 105 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 POU2AF1Q16633 256 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 ANKRD55Q3KP44 614 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 AADACL3Q5VUY0 350 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 ZFAND6Q6FIF0 208 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 CLEC19AQ6UXS0 136 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 HSD17B13Q7Z5P4 300 aaPredicted RBP9.92□□□□□ -0.82
RTN3-212ENST00000543123 TMEM17Q86X19 198 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 DMBX1Q8NFW5 382 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 CCDC140Q96MF4 163 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 FANCD2OSQ96PS1 177 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 PLEKHA2Q9HB19 425 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 COMMD9Q9P000 198 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 STARD9Q9P2P6 4700 aa9.92□□□□□ -0.82
RTN3-212ENST00000543123 IGLV11-55A0A075B6I3 123 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 XRCC3O43542 346 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 NDUFB8O95169 186 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 HLA-AP01891 365 aaKnown RBP9.91□□□□□ -0.82
RTN3-212ENST00000543123 CBLN1P23435 193 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 TAS2R46P59540 309 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 OR2B8PP59922 312 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 UBE2NLQ5JXB2 153 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 ZNF57Q68EA5 555 aaPredicted RBP9.91□□□□□ -0.82
RTN3-212ENST00000543123 ADAMTSL5Q6ZMM2 481 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 CMTM1Q8IZ96 169 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 OR51H1Q8NH63 302 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 MARC2Q969Z3 335 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 GPHA2Q96T91 129 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 QTRT1Q9BXR0 403 aaKnown RBP9.91□□□□□ -0.82
RTN3-212ENST00000543123 RNF167Q9H6Y7 350 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 TMEM140Q9NV12 185 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 EHFQ9NZC4 300 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 DMRT1Q9Y5R6 373 aa9.91□□□□□ -0.82
RTN3-212ENST00000543123 LCE6AA0A183 80 aa9.9□□□□□ -0.82
RTN3-212ENST00000543123 A0A1B0GW64 132 aa9.9□□□□□ -0.82
RTN3-212ENST00000543123 ZNF785A8K8V0 405 aa9.9□□□□□ -0.82
RTN3-212ENST00000543123 OR11H12B2RN74 326 aa9.9□□□□□ -0.82
RTN3-212ENST00000543123 E7EUB6 86 aa9.9□□□□□ -0.82
RTN3-212ENST00000543123 UPK2O00526 184 aa9.9□□□□□ -0.82
RTN3-212ENST00000543123 IGHV3-23P01764 117 aa9.9□□□□□ -0.82
RTN3-212ENST00000543123 REG1AP05451 166 aa9.9□□□□□ -0.82
RTN3-212ENST00000543123 PTHLHP12272 177 aa9.9□□□□□ -0.82
RTN3-212ENST00000543123 TMEM69Q5SWH9 247 aa9.9□□□□□ -0.82
RTN3-212ENST00000543123 ZNF818PQ6ZRF7 136 aa9.9□□□□□ -0.82
RTN3-212ENST00000543123 C19orf35Q6ZS72 473 aa9.9□□□□□ -0.82
RTN3-212ENST00000543123 SRD5A3Q9H8P0 318 aa9.9□□□□□ -0.82
RTN3-212ENST00000543123 TENM2Q9NT68 2774 aa9.9□□□□□ -0.83
RTN3-212ENST00000543123 SACSQ9NZJ4 4579 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 IGLC7A0M8Q6 106 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 TMEM213A2RRL7 107 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 CLEC3BP05452 202 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 FCER2P06734 321 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 CD7P09564 240 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 MYOD1P15172 320 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 S100GP29377 79 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 LINC00322Q6ZN03 302 aaPredicted RBP9.89□□□□□ -0.83
RTN3-212ENST00000543123 DEFB125Q8N687 156 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 GDPD1Q8N9F7 314 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 TSPAN14Q8NG11 270 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 OR52B4Q8NGK2 314 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 OR5H2Q8NGV7 314 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 WDR89Q96FK6 387 aaPredicted RBP9.89□□□□□ -0.83
RTN3-212ENST00000543123 HIPK2Q9H2X6 1198 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 UFC1Q9Y3C8 167 aa9.89□□□□□ -0.83
RTN3-212ENST00000543123 TRAV25A0A0B4J276 109 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 MEIS3P1A6NDR6 274 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 MFSD2BA6NFX1 497 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 MARCH11A6NNE9 402 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 S1PR2O95136 353 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 TRAPPC2P0DI81 140 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 TRAPPC2BP0DI82 140 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 F2RP25116 425 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 PTBP1P26599 531 aaKnown RBP eCLIP9.88□□□□□ -0.835e-7■■■■□ 22.4
RTN3-212ENST00000543123 GPR183P32249 361 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 ELLP55199 621 aaPredicted RBP9.88□□□□□ -0.83
RTN3-212ENST00000543123 PLET1Q6UQ28 207 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 DHRS11Q6UWP2 260 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 RBPMS2Q6ZRY4 209 aaKnown RBP9.88□□□□□ -0.83
RTN3-212ENST00000543123 TMEM61Q8N0U2 210 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 CADM3Q8N126 398 aa9.88□□□□□ -0.83
RTN3-212ENST00000543123 SAMD12Q8N8I0 201 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms