RNA–Protein interactions for RNA: ENST00000542575.6

SLC1A5-203, Transcript of solute carrier family 1 member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A5, Length 2,882 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A5-203ENST00000542575 S1PR3Q99500 378 aa17.15■□□□□ 0.34
SLC1A5-203ENST00000542575 TRAPPC1Q9Y5R8 145 aa17.15■□□□□ 0.34
SLC1A5-203ENST00000542575 CACNA1GO43497 2377 aa17.15■□□□□ 0.34
SLC1A5-203ENST00000542575 SPENQ96T58 3664 aaKnown RBP17.15■□□□□ 0.34
SLC1A5-203ENST00000542575 PDLIM4P50479 330 aa17.14■□□□□ 0.34
SLC1A5-203ENST00000542575 GUSBP1Q15486 140 aa17.14■□□□□ 0.34
SLC1A5-203ENST00000542575 SGMS2Q8NHU3 365 aa17.14■□□□□ 0.34
SLC1A5-203ENST00000542575 AQP7O14520 342 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 TMPRSS2O15393 492 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 RBFOX2O43251 390 aaKnown RBP eCLIP17.14■□□□□ 0.339e-7■■□□□ 11.6
SLC1A5-203ENST00000542575 GFRA3O60609 400 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 MPDU1O75352 247 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 IGHG3P01860 377 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 LCN2P80188 198 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 SLC24A4Q8NFF2 622 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 GGTLC1Q9BX51 225 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 DNAJC4Q9NNZ3 241 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 RP1L1Q8IWN7 2480 aaPredicted RBP17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 TRBV20OR9-2A0A075B6H5 130 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 IGHV1-18A0A0C4DH31 117 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 OPRK1P41145 380 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 LRP11Q86VZ4 500 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 TMEM140Q9NV12 185 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 JPT1Q9UK76 154 aa17.14■□□□□ 0.33
SLC1A5-203ENST00000542575 COL8A2P25067 703 aa17.13■□□□□ 0.33
SLC1A5-203ENST00000542575 VDAC2P45880 294 aaPredicted RBP17.13■□□□□ 0.33
SLC1A5-203ENST00000542575 RELBQ01201 579 aa17.13■□□□□ 0.33
SLC1A5-203ENST00000542575 LPAR2Q9HBW0 351 aa17.13■□□□□ 0.33
SLC1A5-203ENST00000542575 TNCP24821 2201 aa17.13■□□□□ 0.33
SLC1A5-203ENST00000542575 SCO2A0A1W2PP80 73 aa17.13■□□□□ 0.33
SLC1A5-203ENST00000542575 F6UZH7 168 aa17.13■□□□□ 0.33
SLC1A5-203ENST00000542575 GCGP01275 180 aa17.13■□□□□ 0.33
SLC1A5-203ENST00000542575 RPL29P47914 159 aaKnown RBP17.13■□□□□ 0.33
SLC1A5-203ENST00000542575 OR5I1Q13606 314 aa17.13■□□□□ 0.33
SLC1A5-203ENST00000542575 PLA2G2CQ5R387 149 aa17.13■□□□□ 0.33
SLC1A5-203ENST00000542575 UTF1Q5T230 341 aa17.13■□□□□ 0.33
SLC1A5-203ENST00000542575 SFRP2Q96HF1 295 aa17.13■□□□□ 0.33
SLC1A5-203ENST00000542575 MDFIC2A0A1B0GVS7 189 aa17.12■□□□□ 0.33
SLC1A5-203ENST00000542575 STAG3L2P0CL84 134 aa17.12■□□□□ 0.33
SLC1A5-203ENST00000542575 STAG3L3P0CL85 134 aa17.12■□□□□ 0.33
SLC1A5-203ENST00000542575 TCF19Q9Y242 345 aa17.12■□□□□ 0.33
SLC1A5-203ENST00000542575 A0A1B0GUS0 222 aa17.12■□□□□ 0.33
SLC1A5-203ENST00000542575 YPEL1O60688 119 aa17.12■□□□□ 0.33
SLC1A5-203ENST00000542575 YPEL2Q96QA6 119 aa17.12■□□□□ 0.33
SLC1A5-203ENST00000542575 MAP1BP46821 2468 aaKnown RBP17.12■□□□□ 0.33
SLC1A5-203ENST00000542575 SRRM5B3KS81 715 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 MGST3O14880 152 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 CD99P14209 185 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 SPRNQ5BIV9 151 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 MBNL2Q5VZF2 373 aaKnown RBP17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 TCF23Q7RTU1 214 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 FAM90A1Q86YD7 464 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 C1orf162Q8NEQ5 155 aaPredicted RBP17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 NUDT10Q8NFP7 164 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 PPP1R35Q8TAP8 253 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 IFI27L2Q9H2X8 130 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 BOD1L1Q8NFC6 3051 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 CXorf1O96002 111 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 LOXL3P58215 753 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 MSMPQ1L6U9 139 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 TMEM249Q2WGJ8 235 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 CFAP161Q6P656 301 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 C1orf229Q6ZS94 237 aaPredicted RBP17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 GCSAMQ8N6F7 178 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 BDP1A6H8Y1 2624 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 THBS3P49746 956 aa17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 RPL15P61313 204 aaKnown RBP17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 GSX1Q9H4S2 264 aaPredicted RBP17.11■□□□□ 0.33
SLC1A5-203ENST00000542575 FAM90A9PA6NNJ1 464 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 PRSS46E5RG02 174 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 IGLV1-44P01699 117 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 TMEM144Q7Z5S9 345 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 OR52E5Q8NH55 327 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 OCC1Q8TAD7 63 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 HINT2Q9BX68 163 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 NPVFQ9HCQ7 196 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 SEPSECSQ9HD40 501 aaKnown RBP17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 DSCAMO60469 2012 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 MZT1Q08AG7 82 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 FAM201AQ5SY85 155 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 SMIM15Q7Z3B0 74 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 MOGAT3Q86VF5 341 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 TMEM256Q8N2U0 113 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 OR2V2Q96R30 315 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 TUBG2Q9NRH3 451 aa17.1■□□□□ 0.33
SLC1A5-203ENST00000542575 FOXL1Q12952 345 aa17.09■□□□□ 0.33
SLC1A5-203ENST00000542575 SARAFQ96BY9 339 aa17.09■□□□□ 0.33
SLC1A5-203ENST00000542575 CLUHP3Q96NS8 147 aa17.09■□□□□ 0.33
SLC1A5-203ENST00000542575 YTHDF2Q9Y5A9 579 aaKnown RBP17.09■□□□□ 0.33
SLC1A5-203ENST00000542575 YLPM1P49750 1951 aaKnown RBP17.09■□□□□ 0.33
SLC1A5-203ENST00000542575 PRR33A8MZF0 331 aa17.09■□□□□ 0.33
SLC1A5-203ENST00000542575 TMEM238C9JI98 176 aa17.09■□□□□ 0.33
SLC1A5-203ENST00000542575 SPATA31B1PQ5VZV4 182 aa17.09■□□□□ 0.33
SLC1A5-203ENST00000542575 GBGT1Q8N5D6 347 aa17.09■□□□□ 0.33
SLC1A5-203ENST00000542575 PLSCR4Q9NRQ2 329 aa17.09■□□□□ 0.33
SLC1A5-203ENST00000542575 ELOVL5Q9NYP7 299 aa17.09■□□□□ 0.33
SLC1A5-203ENST00000542575 CNOT1A5YKK6 2376 aaKnown RBP17.09■□□□□ 0.33
SLC1A5-203ENST00000542575 EP300Q09472 2414 aaPredicted RBP17.09■□□□□ 0.33
SLC1A5-203ENST00000542575 PLCE1Q9P212 2302 aa17.08■□□□□ 0.33
SLC1A5-203ENST00000542575 IRF2P14316 349 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms