RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 AMMECR1Q9Y4X0 333 aaPredicted RBP16.38■□□□□ 0.21
OTUB1-210ENST00000541478 SPTBN1Q01082 2364 aaKnown RBP16.38■□□□□ 0.21
OTUB1-210ENST00000541478 A0A1W2PPR1 153 aa16.38■□□□□ 0.21
OTUB1-210ENST00000541478 SOX15O60248 233 aa16.38■□□□□ 0.21
OTUB1-210ENST00000541478 MPDU1O75352 247 aa16.38■□□□□ 0.21
OTUB1-210ENST00000541478 IFNA4P05014 189 aa16.38■□□□□ 0.21
OTUB1-210ENST00000541478 IGFBP2P18065 325 aa16.38■□□□□ 0.21
OTUB1-210ENST00000541478 USF1P22415 310 aaPredicted RBP16.38■□□□□ 0.21
OTUB1-210ENST00000541478 NPY1RP25929 384 aa16.38■□□□□ 0.21
OTUB1-210ENST00000541478 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.38■□□□□ 0.21
OTUB1-210ENST00000541478 LY6G5BQ8NDX9 201 aa16.38■□□□□ 0.21
OTUB1-210ENST00000541478 PATZ1Q9HBE1 687 aaKnown RBP16.38■□□□□ 0.21
OTUB1-210ENST00000541478 RRHO14718 337 aa16.37■□□□□ 0.21
OTUB1-210ENST00000541478 IGLV1-47P01700 117 aa16.37■□□□□ 0.21
OTUB1-210ENST00000541478 ELLP55199 621 aaPredicted RBP16.37■□□□□ 0.21
OTUB1-210ENST00000541478 DLK1P80370 383 aa16.37■□□□□ 0.21
OTUB1-210ENST00000541478 GUCA2BQ16661 112 aa16.37■□□□□ 0.21
OTUB1-210ENST00000541478 ATRAIDQ6UW56 229 aa16.37■□□□□ 0.21
OTUB1-210ENST00000541478 TMA7Q9Y2S6 64 aaKnown RBP16.37■□□□□ 0.21
OTUB1-210ENST00000541478 ZFYVE26Q68DK2 2539 aa16.37■□□□□ 0.21
OTUB1-210ENST00000541478 RBFOX3A6NFN3 312 aa16.36■□□□□ 0.21
OTUB1-210ENST00000541478 C9JQL5 133 aa16.36■□□□□ 0.21
OTUB1-210ENST00000541478 C19orf84I3L1E1 186 aa16.36■□□□□ 0.21
OTUB1-210ENST00000541478 MDKP21741 143 aaPredicted RBP16.36■□□□□ 0.21
OTUB1-210ENST00000541478 ATP5IP56385 69 aaPredicted RBP16.36■□□□□ 0.21
OTUB1-210ENST00000541478 DIAPH2-AS1Q14236 149 aa16.36■□□□□ 0.21
OTUB1-210ENST00000541478 SP5Q6BEB4 398 aaPredicted RBP16.36■□□□□ 0.21
OTUB1-210ENST00000541478 MBD3L1Q8WWY6 194 aa16.36■□□□□ 0.21
OTUB1-210ENST00000541478 SSBP3Q9BWW4 388 aaPredicted RBP16.36■□□□□ 0.21
OTUB1-210ENST00000541478 HINT2Q9BX68 163 aa16.36■□□□□ 0.21
OTUB1-210ENST00000541478 ONECUT1Q9UBC0 465 aa16.36■□□□□ 0.21
OTUB1-210ENST00000541478 WDR83OSQ9Y284 106 aa16.36■□□□□ 0.21
OTUB1-210ENST00000541478 MALRD1Q5VYJ5 2156 aa16.36■□□□□ 0.21
OTUB1-210ENST00000541478 A6NNC1 897 aa16.35■□□□□ 0.21
OTUB1-210ENST00000541478 GPR6P46095 362 aaPredicted RBP16.35■□□□□ 0.21
OTUB1-210ENST00000541478 RPL8P62917 257 aaKnown RBP16.35■□□□□ 0.21
OTUB1-210ENST00000541478 RCC1LQ96I51 464 aaKnown RBP16.35■□□□□ 0.21
OTUB1-210ENST00000541478 COMMD5Q9GZQ3 224 aa16.35■□□□□ 0.21
OTUB1-210ENST00000541478 SLC35B3Q9H1N7 401 aa16.35■□□□□ 0.21
OTUB1-210ENST00000541478 VSIRQ9H7M9 311 aa16.35■□□□□ 0.21
OTUB1-210ENST00000541478 TET2Q6N021 2002 aaPredicted RBP16.35■□□□□ 0.21
OTUB1-210ENST00000541478 SMCO3A2RU48 225 aa16.35■□□□□ 0.21
OTUB1-210ENST00000541478 PRSS46E5RG02 174 aa16.35■□□□□ 0.21
OTUB1-210ENST00000541478 GOSR1O95249 250 aa16.35■□□□□ 0.21
OTUB1-210ENST00000541478 F12P00748 615 aaPredicted RBP16.35■□□□□ 0.21
OTUB1-210ENST00000541478 CDKN1AP38936 164 aa16.35■□□□□ 0.21
OTUB1-210ENST00000541478 CCL20P78556 96 aa16.35■□□□□ 0.21
OTUB1-210ENST00000541478 VMA21Q3ZAQ7 101 aa16.35■□□□□ 0.21
OTUB1-210ENST00000541478 ZNF787Q6DD87 383 aa16.35■□□□□ 0.21
OTUB1-210ENST00000541478 C22orf46C9J442 243 aa16.34■□□□□ 0.21
OTUB1-210ENST00000541478 BUB1B-PAK6H3BSN5 160 aa16.34■□□□□ 0.21
OTUB1-210ENST00000541478 LGALS7P47929 136 aa16.34■□□□□ 0.21
OTUB1-210ENST00000541478 TMEM167AQ8TBQ9 72 aa16.34■□□□□ 0.21
OTUB1-210ENST00000541478 LOC105371242A0A075B767 164 aa16.33■□□□□ 0.21
OTUB1-210ENST00000541478 TEX50A0A1B0GTY4 177 aa16.33■□□□□ 0.21
OTUB1-210ENST00000541478 M0R1W7 72 aa16.33■□□□□ 0.21
OTUB1-210ENST00000541478 EFNA4P52798 201 aa16.33■□□□□ 0.21
OTUB1-210ENST00000541478 FFAR4Q5NUL3 377 aa16.33■□□□□ 0.21
OTUB1-210ENST00000541478 OR1L8Q8NGR8 309 aa16.33■□□□□ 0.21
OTUB1-210ENST00000541478 TMEM170AQ8WVE7 144 aa16.33■□□□□ 0.21
OTUB1-210ENST00000541478 UNKLQ9H9P5 680 aaKnown RBP16.33■□□□□ 0.21
OTUB1-210ENST00000541478 LRBAP50851 2863 aa16.33■□□□□ 0.2
OTUB1-210ENST00000541478 CA2P00918 260 aa16.33■□□□□ 0.2
OTUB1-210ENST00000541478 COX7A1P24310 79 aa16.33■□□□□ 0.2
OTUB1-210ENST00000541478 HNF4GQ14541 408 aa16.33■□□□□ 0.2
OTUB1-210ENST00000541478 ZNF726P1Q15940 193 aa16.33■□□□□ 0.2
OTUB1-210ENST00000541478 ACSM6Q6P461 480 aa16.33■□□□□ 0.2
OTUB1-210ENST00000541478 LCN15Q6UWW0 184 aa16.33■□□□□ 0.2
OTUB1-210ENST00000541478 CLDND2Q8NHS1 167 aa16.33■□□□□ 0.2
OTUB1-210ENST00000541478 KCNIP2Q9NS61 270 aa16.33■□□□□ 0.2
OTUB1-210ENST00000541478 SLC39A9Q9NUM3 307 aa16.33■□□□□ 0.2
OTUB1-210ENST00000541478 INSIG2Q9Y5U4 225 aa16.33■□□□□ 0.2
OTUB1-210ENST00000541478 A0A1W2PN81 502 aa16.32■□□□□ 0.2
OTUB1-210ENST00000541478 MAP1LC3B2A6NCE7 125 aa16.32■□□□□ 0.2
OTUB1-210ENST00000541478 FNDC10F2Z333 226 aa16.32■□□□□ 0.2
OTUB1-210ENST00000541478 MYOD1P15172 320 aa16.32■□□□□ 0.2
OTUB1-210ENST00000541478 CHRNA7P36544 502 aa16.32■□□□□ 0.2
OTUB1-210ENST00000541478 KHDC3LQ587J8 217 aa16.32■□□□□ 0.2
OTUB1-210ENST00000541478 ZNF506Q5JVG8 444 aa16.32■□□□□ 0.2
OTUB1-210ENST00000541478 RPEQ96AT9 228 aa16.32■□□□□ 0.2
OTUB1-210ENST00000541478 RARRES2Q99969 163 aa16.32■□□□□ 0.2
OTUB1-210ENST00000541478 MAP1LC3BQ9GZQ8 125 aa16.32■□□□□ 0.2
OTUB1-210ENST00000541478 NPVFQ9HCQ7 196 aa16.32■□□□□ 0.2
OTUB1-210ENST00000541478 OPN1MWP04001 364 aa16.31■□□□□ 0.2
OTUB1-210ENST00000541478 HSPB1P04792 205 aaKnown RBP16.31■□□□□ 0.2
OTUB1-210ENST00000541478 OPN1MW2P0DN77 364 aa16.31■□□□□ 0.2
OTUB1-210ENST00000541478 OPN1MW3P0DN78 364 aa16.31■□□□□ 0.2
OTUB1-210ENST00000541478 HAGHQ16775 308 aa16.31■□□□□ 0.2
OTUB1-210ENST00000541478 ACOT6Q3I5F7 207 aaPredicted RBP16.31■□□□□ 0.2
OTUB1-210ENST00000541478 TREML4Q6UXN2 200 aa16.31■□□□□ 0.2
OTUB1-210ENST00000541478 RPP25LQ8N5L8 163 aaKnown RBP16.31■□□□□ 0.2
OTUB1-210ENST00000541478 OR4P4Q8NGL7 312 aa16.31■□□□□ 0.2
OTUB1-210ENST00000541478 OR10G4Q8NGN3 311 aa16.31■□□□□ 0.2
OTUB1-210ENST00000541478 OR10G9Q8NGN4 311 aa16.31■□□□□ 0.2
OTUB1-210ENST00000541478 OR10G7Q8NGN6 311 aa16.31■□□□□ 0.2
OTUB1-210ENST00000541478 NDUFA4L2Q9NRX3 87 aa16.31■□□□□ 0.2
OTUB1-210ENST00000541478 HRNRQ86YZ3 2850 aaPredicted RBP16.31■□□□□ 0.2
OTUB1-210ENST00000541478 CTXND1A0A1B0GTU2 59 aa16.31■□□□□ 0.2
OTUB1-210ENST00000541478 INS-IGF2F8WCM5 200 aa16.31■□□□□ 0.2
OTUB1-210ENST00000541478 ENSAO43768 121 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms