RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 KLF17Q5JT82 389 aaPredicted RBP14.21□□□□□ -0.13
CLIP1-215ENST00000541108 MMD2Q8IY49 270 aa14.21□□□□□ -0.13
CLIP1-215ENST00000541108 ARPC5LQ9BPX5 153 aa14.21□□□□□ -0.13
CLIP1-215ENST00000541108 SLA2Q9H6Q3 261 aa14.21□□□□□ -0.13
CLIP1-215ENST00000541108 ZC4H2Q9NQZ6 224 aa14.21□□□□□ -0.13
CLIP1-215ENST00000541108 SIGLEC9Q9Y336 463 aa14.21□□□□□ -0.13
CLIP1-215ENST00000541108 FAM24AA6NFZ4 105 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 BCL2L11O43521 198 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 NDUFA3O95167 84 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 MAS1LP35410 378 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 BAXQ07812 192 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 RUSC1-AS1Q66K80 236 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 BRD3OSQ6XYD6 125 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 PPP1R27Q86WC6 154 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 Q8N6K4 173 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 CLCC1Q96S66 551 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 HIPK2Q9H2X6 1198 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 TNCP24821 2201 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 TEX50A0A1B0GTY4 177 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 RRHO14718 337 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 NBR2O15453 112 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 IAPPP10997 89 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 PAX6P26367 422 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 PRCDQ00LT1 54 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 EWSR1Q01844 656 aaKnown RBP eCLIP14.2□□□□□ -0.14
CLIP1-215ENST00000541108 HES1Q14469 280 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 MMDQ15546 238 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 SLC51BQ86UW2 128 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 OR1L8Q8NGR8 309 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 ZDHHC16Q969W1 377 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 ZNF430Q9H8G1 570 aaPredicted RBP14.2□□□□□ -0.14
CLIP1-215ENST00000541108 METTL1Q9UBP6 276 aaKnown RBP14.2□□□□□ -0.14
CLIP1-215ENST00000541108 FAM96BQ9Y3D0 163 aa14.2□□□□□ -0.14
CLIP1-215ENST00000541108 CSMD1Q96PZ7 3565 aa14.19□□□□□ -0.14
CLIP1-215ENST00000541108 TET2Q6N021 2002 aaPredicted RBP14.19□□□□□ -0.14
CLIP1-215ENST00000541108 IGHV3OR16-10A0A075B7F0 116 aa14.19□□□□□ -0.14
CLIP1-215ENST00000541108 CNTFRP26992 372 aa14.19□□□□□ -0.14
CLIP1-215ENST00000541108 VDAC2P45880 294 aaPredicted RBP14.19□□□□□ -0.14
CLIP1-215ENST00000541108 F2RL1P55085 397 aa14.19□□□□□ -0.14
CLIP1-215ENST00000541108 RPP30P78346 268 aaKnown RBP14.19□□□□□ -0.14
CLIP1-215ENST00000541108 PRSS8Q16651 343 aa14.19□□□□□ -0.14
CLIP1-215ENST00000541108 MRGPRG-AS1Q2M3A8 158 aa14.19□□□□□ -0.14
CLIP1-215ENST00000541108 STX12Q86Y82 276 aa14.19□□□□□ -0.14
CLIP1-215ENST00000541108 OR8H1Q8NGG4 311 aa14.19□□□□□ -0.14
CLIP1-215ENST00000541108 NDUFA4L2Q9NRX3 87 aa14.19□□□□□ -0.14
CLIP1-215ENST00000541108 KIAA1456Q9P272 454 aa14.19□□□□□ -0.14
CLIP1-215ENST00000541108 U3KQ87 197 aa14.19□□□□□ -0.14
CLIP1-215ENST00000541108 CCDC168Q8NDH2 2452 aa14.19□□□□□ -0.14
CLIP1-215ENST00000541108 IGSF23A1L1A6 192 aa14.18□□□□□ -0.14
CLIP1-215ENST00000541108 INS-IGF2F8WCM5 200 aa14.18□□□□□ -0.14
CLIP1-215ENST00000541108 FBP1P09467 338 aa14.18□□□□□ -0.14
CLIP1-215ENST00000541108 CD24P25063 80 aa14.18□□□□□ -0.14
CLIP1-215ENST00000541108 SULT1A1P50225 295 aa14.18□□□□□ -0.14
CLIP1-215ENST00000541108 IFITM2Q01629 132 aa14.18□□□□□ -0.14
CLIP1-215ENST00000541108 NHLH2Q02577 135 aa14.18□□□□□ -0.14
CLIP1-215ENST00000541108 HNF4GQ14541 408 aa14.18□□□□□ -0.14
CLIP1-215ENST00000541108 SPANXN5Q5MJ07 72 aa14.18□□□□□ -0.14
CLIP1-215ENST00000541108 TMEM14EPQ6UXP3 125 aa14.18□□□□□ -0.14
CLIP1-215ENST00000541108 CIARTQ8N365 385 aaPredicted RBP14.18□□□□□ -0.14
CLIP1-215ENST00000541108 NANPQ8TBE9 248 aa14.18□□□□□ -0.14
CLIP1-215ENST00000541108 C1RLQ9NZP8 487 aa14.18□□□□□ -0.14
CLIP1-215ENST00000541108 ITGB1BP2Q9UKP3 347 aa14.18□□□□□ -0.14
CLIP1-215ENST00000541108 ABCA1O95477 2261 aa14.18□□□□□ -0.14
CLIP1-215ENST00000541108 A0A0U1RQK1 487 aa14.17□□□□□ -0.14
CLIP1-215ENST00000541108 ACTL6BO94805 426 aa14.17□□□□□ -0.14
CLIP1-215ENST00000541108 SCAF4O95104 1147 aaKnown RBP14.17□□□□□ -0.14
CLIP1-215ENST00000541108 TMEM11P17152 192 aa14.17□□□□□ -0.14
CLIP1-215ENST00000541108 AANATQ16613 207 aa14.17□□□□□ -0.14
CLIP1-215ENST00000541108 PLEKHA3Q9HB20 300 aa14.17□□□□□ -0.14
CLIP1-215ENST00000541108 ENY2Q9NPA8 101 aa14.17□□□□□ -0.14
CLIP1-215ENST00000541108 HEYLQ9NQ87 328 aaPredicted RBP14.17□□□□□ -0.14
CLIP1-215ENST00000541108 STRAPQ9Y3F4 350 aaKnown RBP14.17□□□□□ -0.14
CLIP1-215ENST00000541108 H3BP45 60 aa14.17□□□□□ -0.14
CLIP1-215ENST00000541108 FSHBP01225 129 aa14.17□□□□□ -0.14
CLIP1-215ENST00000541108 HOXA1P49639 335 aaPredicted RBP14.17□□□□□ -0.14
CLIP1-215ENST00000541108 ATP5IP56385 69 aaPredicted RBP14.17□□□□□ -0.14
CLIP1-215ENST00000541108 SPINK9Q5DT21 86 aa14.17□□□□□ -0.14
CLIP1-215ENST00000541108 TEX29Q8N6K0 151 aa14.17□□□□□ -0.14
CLIP1-215ENST00000541108 FBXL15Q9H469 300 aa14.17□□□□□ -0.14
CLIP1-215ENST00000541108 TPSG1Q9NRR2 321 aa14.17□□□□□ -0.14
CLIP1-215ENST00000541108 SVEP1Q4LDE5 3571 aa14.17□□□□□ -0.14
CLIP1-215ENST00000541108 A0A1W2PN81 502 aa14.16□□□□□ -0.14
CLIP1-215ENST00000541108 JTBO76095 146 aa14.16□□□□□ -0.14
CLIP1-215ENST00000541108 CHRNA7P36544 502 aa14.16□□□□□ -0.14
CLIP1-215ENST00000541108 PJVKQ0ZLH3 352 aa14.16□□□□□ -0.14
CLIP1-215ENST00000541108 PLGLAQ15195 96 aa14.16□□□□□ -0.14
CLIP1-215ENST00000541108 TEX261Q6UWH6 196 aa14.16□□□□□ -0.14
CLIP1-215ENST00000541108 STPG2Q8N412 459 aa14.16□□□□□ -0.14
CLIP1-215ENST00000541108 ZNF471Q9BX82 626 aaPredicted RBP14.16□□□□□ -0.14
CLIP1-215ENST00000541108 CYTL1Q9NRR1 136 aa14.16□□□□□ -0.14
CLIP1-215ENST00000541108 FBXL17Q9UF56 701 aa14.16□□□□□ -0.14
CLIP1-215ENST00000541108 ITPR3Q14573 2671 aa14.16□□□□□ -0.14
CLIP1-215ENST00000541108 RGS13O14921 159 aa14.15□□□□□ -0.14
CLIP1-215ENST00000541108 CST7O76096 145 aa14.15□□□□□ -0.14
CLIP1-215ENST00000541108 MYOD1P15172 320 aa14.15□□□□□ -0.14
CLIP1-215ENST00000541108 COMPP49747 757 aaPredicted RBP14.15□□□□□ -0.14
CLIP1-215ENST00000541108 EIF5AP63241 154 aaKnown RBP14.15□□□□□ -0.14
CLIP1-215ENST00000541108 HBG1P69891 147 aa14.15□□□□□ -0.14
CLIP1-215ENST00000541108 HBG2P69892 147 aa14.15□□□□□ -0.14
CLIP1-215ENST00000541108 C5orf64Q2M2E5 130 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms