RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 IFNA17P01571 189 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 SNRNP70P08621 437 aaKnown RBP5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 FBP1P09467 338 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 PET100P0DJ07 73 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 SLC25A6P12236 298 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 PVALBP20472 110 aaPredicted RBP5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 HNF1AP20823 631 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 PSMB6P28072 239 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 NKX2-1P43699 371 aaPredicted RBP5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 CD300CQ08708 224 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 CXorf66Q5JRM2 361 aaPredicted RBP5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 KLF17Q5JT82 389 aaPredicted RBP5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 OR4A47Q6IF82 309 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 Q6ZRM9 215 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 TCTE3Q8IZS6 198 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 DYNAPQ8N1N2 210 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 VSTM2AQ8TAG5 236 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 PPP1R1CQ8WVI7 109 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 C22orf15Q8WYQ4 148 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 CFHR4Q92496 578 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 PPP1R14BQ96C90 147 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 RITA1Q96K30 269 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 RNF5Q99942 180 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 HINT2Q9BX68 163 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 MAGT1Q9H0U3 335 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 KIAA1456Q9P272 454 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 NSG2Q9Y328 171 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 DOCK11Q5JSL3 2073 aa5.33□□□□□ -1.56
CLTCL1-206ENST00000540896 FXYD6-FXYD2A0A087WZ82 144 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 TRAV3A0A0B4J244 114 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 FAM90A9PA6NNJ1 464 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 SRRM4A7MD48 611 aaKnown RBP5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 L7N2F9 121 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 UPK2O00526 184 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 SLC25A17O43808 307 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 ACTL6BO94805 426 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 KBTBD11O94819 623 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 MPC2O95563 127 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 MBPP02686 304 aaPredicted RBP5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 OR9G9P0C7N8 305 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 SAA1P0DJI8 122 aaPredicted RBP5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 TMEM11P17152 192 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 NUP62P37198 522 aaPredicted RBP5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 EIF2B2P49770 351 aaKnown RBP5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 OR2B8PP59922 312 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 UBE2KP61086 200 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 POLR2GP62487 172 aaKnown RBP eCLIP5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 GNB1P62873 340 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 VAMP2P63027 116 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 SRSF4Q08170 494 aaKnown RBP5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 RAB32Q13637 225 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 PSG5Q15238 335 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 MMDQ15546 238 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 POU2AF1Q16633 256 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 LRRC75BQ2VPJ9 315 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 Q5BKY6 102 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 FAM120AOSQ5T036 256 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 BCL6BQ8N143 479 aaPredicted RBP5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 TEX45Q8NA69 505 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 OR4D5Q8NGN0 318 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 AJUBAQ96IF1 538 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 CLCC1Q96S66 551 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 SSX3Q99909 188 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 COMMD5Q9GZQ3 224 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 MEGF9Q9H1U4 602 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 ENY2Q9NPA8 101 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 ZC4H2Q9NQZ6 224 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 COA4Q9NYJ1 87 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 FKBP11Q9NYL4 201 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 C1RLQ9NZP8 487 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 METTL1Q9UBP6 276 aaKnown RBP5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 CACFD1Q9UGQ2 172 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 PRNDQ9UKY0 176 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 OR51B2Q9Y5P1 312 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 SOX21Q9Y651 276 aaPredicted RBP5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 NF1P21359 2839 aa5.32□□□□□ -1.56
CLTCL1-206ENST00000540896 NSD1Q96L73 2696 aaPredicted RBP5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 BTBD17A6NE02 478 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 CEBPZOSA8MTT3 80 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 FAM90A26D6RGX4 464 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 BOLA2-SMG1P6H3BVE0 249 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 NBR2O15453 112 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 ARPC5O15511 151 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 SYNGR2O43760 224 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 CHST1O43916 411 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 SSSCA1O60232 199 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 MED6O75586 246 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 OR2F2O95006 317 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 SPDEFO95238 335 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 CNIH1O95406 144 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 IGLV2-23P01705 113 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 C1QBP02746 253 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 OPN1MWP04001 364 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 OPN1MW2P0DN77 364 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 OPN1MW3P0DN78 364 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 CNTFRP26992 372 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 F2RL1P55085 397 aa5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 RPL8P62917 257 aaKnown RBP5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 HABP2Q14520 560 aaPredicted RBP5.31□□□□□ -1.56
CLTCL1-206ENST00000540896 LY6EQ16553 131 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms