RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 NDUFB8O95169 186 aa12.21□□□□□ -0.45
TRIM65-203ENST00000540812 TMEM69Q5SWH9 247 aa12.21□□□□□ -0.45
TRIM65-203ENST00000540812 MZT2AQ6P582 158 aa12.21□□□□□ -0.45
TRIM65-203ENST00000540812 SLC25A42Q86VD7 318 aa12.21□□□□□ -0.45
TRIM65-203ENST00000540812 FANCD2OSQ96PS1 177 aa12.21□□□□□ -0.45
TRIM65-203ENST00000540812 FYTTD1Q96QD9 318 aaKnown RBP12.21□□□□□ -0.45
TRIM65-203ENST00000540812 FBXL7Q9UJT9 491 aa12.21□□□□□ -0.45
TRIM65-203ENST00000540812 MRPS7Q9Y2R9 242 aaKnown RBP12.21□□□□□ -0.45
TRIM65-203ENST00000540812 PRELID3BQ9Y3B1 194 aa12.21□□□□□ -0.45
TRIM65-203ENST00000540812 SMIM31A0A1B0GVY4 71 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 NPIPB5A8MRT5 1133 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 LGALS9O00182 355 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 JTBO76095 146 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 MYOD1P15172 320 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 AREGP15514 252 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 CBX5P45973 191 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 RPL27AP46776 148 aaKnown RBP12.2□□□□□ -0.46
TRIM65-203ENST00000540812 SPCS2Q15005 226 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 CNIH2Q6PI25 160 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 CLEC19AQ6UXS0 136 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 HOGA1Q86XE5 327 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 PUSL1Q8N0Z8 303 aaKnown RBP12.2□□□□□ -0.46
TRIM65-203ENST00000540812 OR4S2Q8NH73 311 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 TMEM167AQ8TBQ9 72 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 CCDC140Q96MF4 163 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 OR2A7Q96R45 310 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 GPHA2Q96T91 129 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 TECRQ9NZ01 308 aaKnown RBP12.2□□□□□ -0.46
TRIM65-203ENST00000540812 ANXA10Q9UJ72 324 aa12.2□□□□□ -0.46
TRIM65-203ENST00000540812 DPPA5A6NC42 116 aa12.19□□□□□ -0.46
TRIM65-203ENST00000540812 NOL3O60936 208 aaKnown RBP12.19□□□□□ -0.46
TRIM65-203ENST00000540812 EIF4EP06730 217 aaKnown RBP12.19□□□□□ -0.46
TRIM65-203ENST00000540812 ZNF735P0CB33 412 aa12.19□□□□□ -0.46
TRIM65-203ENST00000540812 TAS2R20P59543 309 aa12.19□□□□□ -0.46
TRIM65-203ENST00000540812 FAM209BQ5JX69 171 aa12.19□□□□□ -0.46
TRIM65-203ENST00000540812 GPHB5Q86YW7 130 aa12.19□□□□□ -0.46
TRIM65-203ENST00000540812 IL17DQ8TAD2 202 aa12.19□□□□□ -0.46
TRIM65-203ENST00000540812 TCTEX1D2Q8WW35 142 aa12.19□□□□□ -0.46
TRIM65-203ENST00000540812 HSD17B10Q99714 261 aaKnown RBP12.19□□□□□ -0.46
TRIM65-203ENST00000540812 SLC2A9Q9NRM0 540 aa12.19□□□□□ -0.46
TRIM65-203ENST00000540812 TAS2R8Q9NYW2 309 aa12.19□□□□□ -0.46
TRIM65-203ENST00000540812 TMEM213A2RRL7 107 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 HPGDSO60760 199 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 SLC22A5O76082 557 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 CRYGCP07315 174 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 ELK1P19419 428 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 CBLN1P23435 193 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 PSMB6P28072 239 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 ARL3P36405 182 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 SSX9Q7RTT3 188 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 TMEM61Q8N0U2 210 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 MFSD4AQ8N468 514 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 GVQW1Q8N7I0 195 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 BEST4Q8NFU0 473 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 VSTM2AQ8TAG5 236 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 MLXQ9UH92 298 aa12.18□□□□□ -0.46
TRIM65-203ENST00000540812 H3BMQ9 156 aa12.17□□□□□ -0.46
TRIM65-203ENST00000540812 REG1AP05451 166 aa12.17□□□□□ -0.46
TRIM65-203ENST00000540812 PTHLHP12272 177 aa12.17□□□□□ -0.46
TRIM65-203ENST00000540812 CTRB1P17538 263 aa12.17□□□□□ -0.46
TRIM65-203ENST00000540812 PRSS3P35030 304 aa12.17□□□□□ -0.46
TRIM65-203ENST00000540812 MAS1LP35410 378 aa12.17□□□□□ -0.46
TRIM65-203ENST00000540812 CTRB2Q6GPI1 263 aa12.17□□□□□ -0.46
TRIM65-203ENST00000540812 DYNC2LI1Q8TCX1 351 aa12.17□□□□□ -0.46
TRIM65-203ENST00000540812 CCDC59Q9P031 241 aaKnown RBP12.17□□□□□ -0.46
TRIM65-203ENST00000540812 ZNF320A2RRD8 509 aa12.16□□□□□ -0.46
TRIM65-203ENST00000540812 MFSD2BA6NFX1 497 aa12.16□□□□□ -0.46
TRIM65-203ENST00000540812 CGB1A6NKQ9 187 aa12.16□□□□□ -0.46
TRIM65-203ENST00000540812 TNFSF12O43508 249 aa12.16□□□□□ -0.46
TRIM65-203ENST00000540812 ARPC4P59998 168 aa12.16□□□□□ -0.46
TRIM65-203ENST00000540812 KLK9Q2XQG4 91 aa12.16□□□□□ -0.46
TRIM65-203ENST00000540812 ZNF57Q68EA5 555 aaPredicted RBP12.16□□□□□ -0.46
TRIM65-203ENST00000540812 SLC16A13Q7RTY0 426 aa12.16□□□□□ -0.46
TRIM65-203ENST00000540812 UXS1Q8NBZ7 420 aa12.16□□□□□ -0.46
TRIM65-203ENST00000540812 EEF1AKMT3Q96AZ1 226 aa12.16□□□□□ -0.46
TRIM65-203ENST00000540812 KLK9Q9UKQ9 250 aa12.16□□□□□ -0.46
TRIM65-203ENST00000540812 ANAPC10Q9UM13 185 aa12.16□□□□□ -0.46
TRIM65-203ENST00000540812 IGLV11-55A0A075B6I3 123 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 A8MWP6 167 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 FAM25AB3EWG3 89 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 FAM25CB3EWG5 89 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 FAM25GB3EWG6 89 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 SCAF4O95104 1147 aaKnown RBP12.15□□□□□ -0.46
TRIM65-203ENST00000540812 HLA-GP17693 338 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 RPL8P62917 257 aaKnown RBP12.15□□□□□ -0.46
TRIM65-203ENST00000540812 FAM106AQ4KMX7 169 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 TM4SF20Q53R12 229 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 UNQ9165/PRO28630Q6UXU0 137 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 ZNF66Q6ZN08 573 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 OR5AP2Q8NGF4 316 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 OVOL2Q9BRP0 275 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 SCPEP1Q9HB40 452 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 IFT46Q9NQC8 304 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 CCL28Q9NRJ3 127 aa12.15□□□□□ -0.46
TRIM65-203ENST00000540812 MEIS3P1A6NDR6 274 aa12.14□□□□□ -0.47
TRIM65-203ENST00000540812 SULT1C2O00338 296 aa12.14□□□□□ -0.47
TRIM65-203ENST00000540812 HRASP01112 189 aa12.14□□□□□ -0.47
TRIM65-203ENST00000540812 NAT1P18440 290 aa12.14□□□□□ -0.47
TRIM65-203ENST00000540812 OR4A47Q6IF82 309 aa12.14□□□□□ -0.47
TRIM65-203ENST00000540812 BTNL8Q6UX41 500 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms