RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 CUL9Q8IWT3 2517 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 TMEM210A6NLX4 147 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 RAB29O14966 203 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 HOXB1P14653 301 aaPredicted RBP11.66□□□□□ -0.54
INO80E-203ENST00000540562 IGFBP2P18065 325 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 FXYD3Q14802 87 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 LINC01551Q86U37 167 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 STARD4Q96DR4 205 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 YTHDF2Q9Y5A9 579 aaKnown RBP11.66□□□□□ -0.54
INO80E-203ENST00000540562 TRAPPC1Q9Y5R8 145 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 TRBV24-1A0A075B6N3 115 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 SAA2-SAA4A0A096LPE2 208 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 SAA2P0DJI9 122 aaPredicted RBP11.66□□□□□ -0.54
INO80E-203ENST00000540562 GZMBP10144 247 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 DDTP30046 118 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 KIAA1644Q3SXP7 199 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 SRD5A3Q9H8P0 318 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 PITPNC1Q9UKF7 332 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 TCF19Q9Y242 345 aa11.66□□□□□ -0.54
INO80E-203ENST00000540562 CGAP01215 116 aa11.65□□□□□ -0.54
INO80E-203ENST00000540562 FTH1P19P0C7X4 201 aa11.65□□□□□ -0.54
INO80E-203ENST00000540562 P0C879 139 aa11.65□□□□□ -0.54
INO80E-203ENST00000540562 ACSF3Q4G176 576 aaPredicted RBP11.65□□□□□ -0.54
INO80E-203ENST00000540562 OR10W1Q8NGF6 305 aa11.65□□□□□ -0.54
INO80E-203ENST00000540562 CALYQ9NYX4 217 aa11.65□□□□□ -0.54
INO80E-203ENST00000540562 F6UZH7 168 aa11.65□□□□□ -0.54
INO80E-203ENST00000540562 TMPRSS2O15393 492 aa11.65□□□□□ -0.54
INO80E-203ENST00000540562 TNFSF13O75888 250 aa11.65□□□□□ -0.54
INO80E-203ENST00000540562 PLAUP00749 431 aa11.65□□□□□ -0.54
INO80E-203ENST00000540562 TMEM183AQ8IXX5 376 aa11.65□□□□□ -0.54
INO80E-203ENST00000540562 Q8N7P7 452 aa11.65□□□□□ -0.54
INO80E-203ENST00000540562 CIB3Q96Q77 187 aaPredicted RBP11.65□□□□□ -0.54
INO80E-203ENST00000540562 IGHV3-21A0A0B4J1V1 117 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 FAM90A26D6RGX4 464 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 TSTD3H0UI37 97 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 CA2P00918 260 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 RAB4BP61018 213 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 EIF4EBP1Q13541 118 aaPredicted RBP11.64□□□□□ -0.55
INO80E-203ENST00000540562 CT45A1Q5HYN5 189 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 SEM1Q6ZVN7 128 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 DMRTC2Q8IXT2 367 aaPredicted RBP11.64□□□□□ -0.55
INO80E-203ENST00000540562 CT45A3Q8NHU0 189 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 OCC1Q8TAD7 63 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 GGTLC1Q9BX51 225 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 IFI27L2Q9H2X8 130 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 DKK4Q9UBT3 224 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 GFRA3O60609 400 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 LGALS4P56470 323 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 ARSJQ5FYB0 599 aaPredicted RBP11.64□□□□□ -0.55
INO80E-203ENST00000540562 MIR17HGQ75NE6 70 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 DOLPP1Q86YN1 238 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 ZNF664Q8N3J9 261 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 TP53TG5Q9Y2B4 290 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 MALRD1Q5VYJ5 2156 aa11.64□□□□□ -0.55
INO80E-203ENST00000540562 MDFIC2A0A1B0GVS7 189 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 F2Z2F3 143 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 OR7C2O60412 319 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 CA1P00915 261 aaPredicted RBP11.63□□□□□ -0.55
INO80E-203ENST00000540562 ZNF883P0CG24 379 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 RPL31P62899 125 aaKnown RBP11.63□□□□□ -0.55
INO80E-203ENST00000540562 PLA2G2CQ5R387 149 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 OR4A47Q6IF82 309 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 STPG3Q8N7X2 389 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 SARAFQ96BY9 339 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 FAM103A1Q9BTL3 118 aaKnown RBP11.63□□□□□ -0.55
INO80E-203ENST00000540562 WDR83OSQ9Y284 106 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 ELOA3CA0A087WX78 387 aaPredicted RBP11.63□□□□□ -0.55
INO80E-203ENST00000540562 ZNF705FA8MVS1 300 aaPredicted RBP11.63□□□□□ -0.55
INO80E-203ENST00000540562 ZNF705DP0CH99 300 aaPredicted RBP11.63□□□□□ -0.55
INO80E-203ENST00000540562 ZNF705BP0CI00 300 aaPredicted RBP11.63□□□□□ -0.55
INO80E-203ENST00000540562 ZNF474Q6S9Z5 364 aaPredicted RBP11.63□□□□□ -0.55
INO80E-203ENST00000540562 ACY3Q96HD9 319 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 ENY2Q9NPA8 101 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 ZNF71Q9NQZ8 489 aaPredicted RBP11.63□□□□□ -0.55
INO80E-203ENST00000540562 MBP02144 154 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 KITLGP21583 273 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 RELBQ01201 579 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 C10orf55Q5SWW7 151 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 FAM90A1Q86YD7 464 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 CTDSP1Q9GZU7 261 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 MANBALQ9NQG1 85 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 ARHGAP32A7KAX9 2087 aa11.63□□□□□ -0.55
INO80E-203ENST00000540562 IGHV3-72A0A0B4J1Y9 119 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 TMEM250H0YL14 139 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 HPRT1P00492 218 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 REG1AP05451 166 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 IL6RP08887 468 aaPredicted RBP11.62□□□□□ -0.55
INO80E-203ENST00000540562 CCL3L1P16619 93 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 TIMP3P35625 211 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 MRPS11P82912 194 aaKnown RBP11.62□□□□□ -0.55
INO80E-203ENST00000540562 ZNF90Q03938 601 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 PSG5Q15238 335 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 MISP3Q96FF7 219 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 MRPL37Q9BZE1 423 aaKnown RBP11.62□□□□□ -0.55
INO80E-203ENST00000540562 CBLN4Q9NTU7 201 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 SERTAD4Q9NUC0 356 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 DYSFO75923 2080 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 TRAV17A0A0B4J275 112 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 PRR33A8MZF0 331 aa11.62□□□□□ -0.55
INO80E-203ENST00000540562 MGST1P10620 155 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms