RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 OR4S2Q8NH73 311 aa10.26□□□□□ -0.77
CCDC42-202ENST00000539522 FLYWCH2Q96CP2 140 aaKnown RBP10.26□□□□□ -0.77
CCDC42-202ENST00000539522 RRNAD1Q96FB5 475 aaKnown RBP10.26□□□□□ -0.77
CCDC42-202ENST00000539522 WDR89Q96FK6 387 aaPredicted RBP10.26□□□□□ -0.77
CCDC42-202ENST00000539522 RNF5Q99942 180 aa10.26□□□□□ -0.77
CCDC42-202ENST00000539522 AIFM2Q9BRQ8 373 aa10.26□□□□□ -0.77
CCDC42-202ENST00000539522 WNT10AQ9GZT5 417 aa10.26□□□□□ -0.77
CCDC42-202ENST00000539522 FBXO7Q9Y3I1 522 aa10.26□□□□□ -0.77
CCDC42-202ENST00000539522 IGHV7-81A0A0B4J1V7 117 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 NCBP2LA6PVI3 153 aaKnown RBP10.25□□□□□ -0.77
CCDC42-202ENST00000539522 MPTX1A8MV57 137 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 SMLR1H3BR10 107 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 S1PR2O95136 353 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 EGR2P11161 476 aaPredicted RBP10.25□□□□□ -0.77
CCDC42-202ENST00000539522 AWAT1Q58HT5 328 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 Q5BKY6 102 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 NMSQ5H8A3 153 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 C10orf99Q6UWK7 81 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 ZBTB8BQ8NAP8 495 aaPredicted RBP10.25□□□□□ -0.77
CCDC42-202ENST00000539522 OR8H1Q8NGG4 311 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 PPP1R1CQ8WVI7 109 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 TMEM158Q8WZ71 300 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 GPR146Q96CH1 333 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 HARBI1Q96MB7 349 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 NPFFR1Q9GZQ6 430 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 MMP24Q9Y5R2 645 aa10.25□□□□□ -0.77
CCDC42-202ENST00000539522 TET2Q6N021 2002 aaPredicted RBP10.24□□□□□ -0.77
CCDC42-202ENST00000539522 SLC25A17O43808 307 aa10.24□□□□□ -0.77
CCDC42-202ENST00000539522 IGHG2P01859 326 aa10.24□□□□□ -0.77
CCDC42-202ENST00000539522 RLN2P04090 185 aa10.24□□□□□ -0.77
CCDC42-202ENST00000539522 SAA1P0DJI8 122 aaPredicted RBP10.24□□□□□ -0.77
CCDC42-202ENST00000539522 SLC25A4P12235 298 aa10.24□□□□□ -0.77
CCDC42-202ENST00000539522 RPS16P62249 146 aaKnown RBP10.24□□□□□ -0.77
CCDC42-202ENST00000539522 C19orf54Q5BKX5 351 aa10.24□□□□□ -0.77
CCDC42-202ENST00000539522 THOC7Q6I9Y2 204 aaKnown RBP10.24□□□□□ -0.77
CCDC42-202ENST00000539522 TMEM65Q6PI78 240 aa10.24□□□□□ -0.77
CCDC42-202ENST00000539522 PUSL1Q8N0Z8 303 aaKnown RBP10.24□□□□□ -0.77
CCDC42-202ENST00000539522 RNASE11Q8TAA1 199 aaKnown RBP10.24□□□□□ -0.77
CCDC42-202ENST00000539522 OSR1Q8TAX0 266 aaPredicted RBP10.24□□□□□ -0.77
CCDC42-202ENST00000539522 THAP6Q8TBB0 222 aa10.24□□□□□ -0.77
CCDC42-202ENST00000539522 TNCP24821 2201 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 TRRAPQ9Y4A5 3859 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 TRAV3A0A0B4J244 114 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 A0A1B0GW64 132 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 CLPSL1A2RUU4 121 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 HMSDA8MTL9 139 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 M0QZK8 103 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 SHOXO15266 292 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 SPDEFO95238 335 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 MPC2O95563 127 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 HRASP01112 189 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 KRASP01116 189 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 IGKV1-5P01602 117 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 HLA-DRB1P01911 266 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 MYOD1P15172 320 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 NQO2P16083 231 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 LGALS7P47929 136 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 AKR1C2P52895 323 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 UBE2KP61086 200 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 POU2AF1Q16633 256 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 C11orf87Q6NUJ2 197 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 H2BFWTQ7Z2G1 175 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 NOL4LQ96MY1 436 aaPredicted RBP10.23□□□□□ -0.77
CCDC42-202ENST00000539522 TSNAXQ99598 290 aaKnown RBP10.23□□□□□ -0.77
CCDC42-202ENST00000539522 PRSS22Q9GZN4 317 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 METTL1Q9UBP6 276 aaKnown RBP10.23□□□□□ -0.77
CCDC42-202ENST00000539522 LINC00527Q9UJ94 153 aa10.23□□□□□ -0.77
CCDC42-202ENST00000539522 CGB1A6NKQ9 187 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 E7EUB6 86 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 G3V3Q6 166 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 ST8SIA3O43173 380 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 PITX3O75364 302 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 CA2P00918 260 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 CRYBA1P05813 215 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 P0C879 139 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 PET100P0DJ07 73 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 G6PCP35575 357 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 ERVK-16P61578 105 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 ID3Q02535 119 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 CFHR3Q02985 330 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 SMCO1Q147U7 214 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 TCTEX1D4Q5JR98 221 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 OR11H4Q8NGC9 324 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 OR4D5Q8NGN0 318 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 OR4F5Q8NH21 305 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 WFDC12Q8WWY7 111 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 R3HDM4Q96D70 268 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 CLCC1Q96S66 551 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 RNF126Q9BV68 326 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.22□□□□□ -0.77
CCDC42-202ENST00000539522 COA4Q9NYJ1 87 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 CACFD1Q9UGQ2 172 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 RNF114Q9Y508 228 aa10.22□□□□□ -0.77
CCDC42-202ENST00000539522 TRAV14DV4A0A0A6YYC5 116 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 A0A0G2JRQ6 117 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 ATP6V0E1O15342 81 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 MBPP02686 304 aaPredicted RBP10.21□□□□□ -0.77
CCDC42-202ENST00000539522 LYL1P12980 280 aa10.21□□□□□ -0.77
CCDC42-202ENST00000539522 NKX2-1P43699 371 aaPredicted RBP10.21□□□□□ -0.77
CCDC42-202ENST00000539522 NKX2-5P52952 324 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms