RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 NOXA1Q86UR1 476 aa8.51□□□□□ -1.05
LEMD3-202ENST00000539442 PPP1R27Q86WC6 154 aa8.51□□□□□ -1.05
LEMD3-202ENST00000539442 MMD2Q8IY49 270 aa8.51□□□□□ -1.05
LEMD3-202ENST00000539442 FAM71E2Q8N5Q1 922 aa8.51□□□□□ -1.05
LEMD3-202ENST00000539442 PIFOQ8TCI5 191 aa8.51□□□□□ -1.05
LEMD3-202ENST00000539442 RBMXL1Q96E39 390 aaKnown RBP8.51□□□□□ -1.05
LEMD3-202ENST00000539442 HYLS1Q96M11 299 aa8.51□□□□□ -1.05
LEMD3-202ENST00000539442 SSX3Q99909 188 aa8.51□□□□□ -1.05
LEMD3-202ENST00000539442 QTRT1Q9BXR0 403 aaKnown RBP8.51□□□□□ -1.05
LEMD3-202ENST00000539442 PRDM13Q9H4Q3 707 aa8.51□□□□□ -1.05
LEMD3-202ENST00000539442 METTL1Q9UBP6 276 aaKnown RBP8.51□□□□□ -1.05
LEMD3-202ENST00000539442 PITPNC1Q9UKF7 332 aa8.51□□□□□ -1.05
LEMD3-202ENST00000539442 TCF19Q9Y242 345 aa8.51□□□□□ -1.05
LEMD3-202ENST00000539442 RCL1Q9Y2P8 373 aaKnown RBP8.51□□□□□ -1.05
LEMD3-202ENST00000539442 NSG2Q9Y328 171 aa8.51□□□□□ -1.05
LEMD3-202ENST00000539442 LSM5Q9Y4Y9 91 aaKnown RBP8.51□□□□□ -1.05
LEMD3-202ENST00000539442 E5RGE8 158 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 H0YIZ8 118 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 H3BUX3 64 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 SYNGR2O43760 224 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 OR2F2O95006 317 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 IFNA17P01571 189 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 SRP14P37108 136 aaKnown RBP8.5□□□□□ -1.05
LEMD3-202ENST00000539442 F2RL1P55085 397 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 HSPE1P61604 102 aaKnown RBP8.5□□□□□ -1.05
LEMD3-202ENST00000539442 POLR2GP62487 172 aaKnown RBP eCLIP8.5□□□□□ -1.05
LEMD3-202ENST00000539442 SCGB2A2Q13296 93 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 HNF4GQ14541 408 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 PLGLAQ15195 96 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 PRSS8Q16651 343 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 C5orf64Q2M2E5 130 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 Q5BKY6 102 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 TMEM65Q6PI78 240 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 C16orf82Q7Z2V1 217 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 BCL6BQ8N143 479 aaPredicted RBP8.5□□□□□ -1.05
LEMD3-202ENST00000539442 OR5R1Q8NH85 324 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 RBM14Q96PK6 669 aaKnown RBP8.5□□□□□ -1.05
LEMD3-202ENST00000539442 CIB3Q96Q77 187 aaPredicted RBP8.5□□□□□ -1.05
LEMD3-202ENST00000539442 RAB40CQ96S21 281 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 COMMD5Q9GZQ3 224 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 FBXL15Q9H469 300 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 ZNF430Q9H8G1 570 aaPredicted RBP8.5□□□□□ -1.05
LEMD3-202ENST00000539442 PLSCR3Q9NRY6 295 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 MBD2Q9UBB5 411 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 OR51B2Q9Y5P1 312 aa8.5□□□□□ -1.05
LEMD3-202ENST00000539442 CSPG4Q6UVK1 2322 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 FXYD6-FXYD2A0A087WZ82 144 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 A6NDX4 124 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 BTBD17A6NE02 478 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 HMSDA8MTL9 139 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 BOLA2-SMG1P6H3BVE0 249 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 M0QZK8 103 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 FGF16O43320 207 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 GPR137BO60478 399 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 ACTL6BO94805 426 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 NXPH3O95157 252 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 TAS2R30P59541 319 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 PRCDQ00LT1 54 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 MRGPRG-AS1Q2M3A8 158 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 FBLN7Q53RD9 439 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 Q6YL49 198 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 OR1L8Q8NGR8 309 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 DTD1Q8TEA8 209 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 RNF126Q9BV68 326 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 RBKSQ9H477 322 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 C11orf1Q9H5F2 150 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 TPSG1Q9NRR2 321 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 OR5AC2Q9NZP5 309 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 MOB4Q9Y3A3 225 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 SOX21Q9Y651 276 aaPredicted RBP8.49□□□□□ -1.05
LEMD3-202ENST00000539442 WSB1Q9Y6I7 421 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 ZANQ9Y493 2812 aa8.49□□□□□ -1.05
LEMD3-202ENST00000539442 TEX50A0A1B0GTY4 177 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 MDFIC2A0A1B0GVS7 189 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 A0A1W2PN81 502 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 NCBP2LA6PVI3 153 aaKnown RBP8.48□□□□□ -1.05
LEMD3-202ENST00000539442 CEBPZOSA8MTT3 80 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 INS-IGF2F8WCM5 200 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 L7N2F9 121 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 CHST1O43916 411 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 SSSCA1O60232 199 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 LY6G6DO95868 133 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 CHRNA7P36544 502 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 IER3P46695 156 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 P2RY1P47900 373 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 COMPP49747 757 aaPredicted RBP8.48□□□□□ -1.05
LEMD3-202ENST00000539442 RPL23AP62750 156 aaKnown RBP8.48□□□□□ -1.05
LEMD3-202ENST00000539442 VAMP2P63027 116 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 TNXAQ16473 311 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 IL17RELQ6ZVW7 336 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 ZNF546Q86UE3 836 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 MRPL41Q8IXM3 137 aaKnown RBP8.48□□□□□ -1.05
LEMD3-202ENST00000539442 Q8N9W7 124 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 OR11H4Q8NGC9 324 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 SSMEM1Q8WWF3 244 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 C22orf15Q8WYQ4 148 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 DCUN1D4Q92564 292 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 SMIM8Q96KF7 97 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 CLCC1Q96S66 551 aa8.48□□□□□ -1.05
LEMD3-202ENST00000539442 RASL11BQ9BPW5 248 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms