RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 PKIGQ9Y2B9 76 aa0.96□□□□□ -2.26
CCDC7-209ENST00000539197 AMMECR1Q9Y4X0 333 aaPredicted RBP0.96□□□□□ -2.26
CCDC7-209ENST00000539197 LSM5Q9Y4Y9 91 aaKnown RBP0.96□□□□□ -2.26
CCDC7-209ENST00000539197 DSCAML1Q8TD84 2053 aa0.96□□□□□ -2.26
CCDC7-209ENST00000539197 RGS12O14924 1447 aa0.96□□□□□ -2.26
CCDC7-209ENST00000539197 CHD2O14647 1828 aaKnown RBP0.95□□□□□ -2.26
CCDC7-209ENST00000539197 TMSB15BA0A087X1C1 80 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 ARRDC5A6NEK1 342 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 SMIM23A6NLE4 172 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 E2F6O75461 281 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 LGALS1P09382 135 aaKnown RBP0.95□□□□□ -2.26
CCDC7-209ENST00000539197 UCHL1P09936 223 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 S100A7P31151 101 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 RPL28P46779 137 aaKnown RBP0.95□□□□□ -2.26
CCDC7-209ENST00000539197 OR4D2P58180 307 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 SPCS3P61009 180 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 ERHP84090 104 aaKnown RBP0.95□□□□□ -2.26
CCDC7-209ENST00000539197 IFITM2Q01629 132 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 ZNF90Q03938 601 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 HIST3H3Q16695 136 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 SYPL2Q5VXT5 272 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 OR5B17Q8NGF7 314 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 OR1L8Q8NGR8 309 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 IMP4Q96G21 291 aaKnown RBP0.95□□□□□ -2.26
CCDC7-209ENST00000539197 ERMAPQ96PL5 475 aaPredicted RBP0.95□□□□□ -2.26
CCDC7-209ENST00000539197 PPP1R2P1Q96PQ5 205 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 TIMM21Q9BVV7 248 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 OR8D2Q9GZM6 311 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 VCX3BQ9H321 246 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 FAM96AQ9H5X1 160 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 CISHQ9NSE2 258 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 NAT8Q9UHE5 227 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 NCKAP5O14513 1909 aa0.95□□□□□ -2.26
CCDC7-209ENST00000539197 ATAD5Q96QE3 1844 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 COL6A6A6NMZ7 2263 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 TRBV20OR9-2A0A075B6H5 130 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 A0A0J9YW62 118 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 A0A0J9YY10 115 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 A0A1B0GW54 56 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 A0A1B0GX78 115 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 ZNF705FA8MVS1 300 aaPredicted RBP0.94□□□□□ -2.26
CCDC7-209ENST00000539197 LEPROTO15243 131 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 CHP2O43745 196 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 KLRC4O43908 158 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 KRT75O95678 551 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 S100A6P06703 90 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 OR5G3P0C626 314 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 ZNF705DP0CH99 300 aaPredicted RBP0.94□□□□□ -2.26
CCDC7-209ENST00000539197 KCNE1P15382 129 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 HLA-DMBP28068 263 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 ALDH3A1P30838 453 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 CDKN2CP42773 168 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 MAGEA12P43365 314 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 CSN1S1P47710 185 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 SULT1A1P50225 295 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 RAP1GDS1P52306 607 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 CEBPGP53567 150 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 DEFA1P59665 94 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 LSM6P62312 80 aaKnown RBP0.94□□□□□ -2.26
CCDC7-209ENST00000539197 AESQ08117 197 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 SLC38A11Q08AI6 406 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 RGS21Q2M5E4 152 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 PABPC1L2AQ5JQF8 200 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 ZNF705AQ6ZN79 300 aaPredicted RBP0.94□□□□□ -2.26
CCDC7-209ENST00000539197 Q6ZTI0 123 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 LRRC28Q86X40 367 aaPredicted RBP0.94□□□□□ -2.26
CCDC7-209ENST00000539197 TRAPPC5Q8IUR0 188 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 C1orf158Q8N1D5 194 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 SPACA4Q8TDM5 124 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 ACOT12Q8WYK0 555 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 ITFG2Q969R8 447 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 OR51V1Q9H2C8 321 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 UCK1Q9HA47 277 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 VPS29Q9UBQ0 182 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 FUT9Q9Y231 359 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 TIMM22Q9Y584 194 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 MALRD1Q5VYJ5 2156 aa0.94□□□□□ -2.26
CCDC7-209ENST00000539197 FN1P02751 2386 aaKnown RBP0.93□□□□□ -2.26
CCDC7-209ENST00000539197 PLB1Q6P1J6 1458 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 ZFYVE9O95405 1425 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 DCCP43146 1447 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 NUP160Q12769 1436 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 IGHV3-64A0A075B6Q5 118 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 IGHV1-18A0A0C4DH31 117 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 GGT3PA6NGU5 568 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 CLDN24A6NM45 220 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 KPNA3O00505 521 aaPredicted RBP0.93□□□□□ -2.26
CCDC7-209ENST00000539197 CREBL2O60519 120 aaPredicted RBP0.93□□□□□ -2.26
CCDC7-209ENST00000539197 PGLYRP1O75594 196 aaPredicted RBP0.93□□□□□ -2.26
CCDC7-209ENST00000539197 RPP14O95059 124 aaKnown RBP0.93□□□□□ -2.26
CCDC7-209ENST00000539197 PPBPP02775 128 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 TCRBP04435 133 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 SRP19P09132 144 aaKnown RBP0.93□□□□□ -2.26
CCDC7-209ENST00000539197 IDH3GP51553 393 aaPredicted RBP0.93□□□□□ -2.26
CCDC7-209ENST00000539197 TPI1P60174 286 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 RAB14P61106 215 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 AP1S1P61966 158 aa0.93□□□□□ -2.26
CCDC7-209ENST00000539197 POLR2GP62487 172 aaKnown RBP eCLIP0.93□□□□□ -2.26
CCDC7-209ENST00000539197 RANP62826 216 aaKnown RBP0.93□□□□□ -2.26
CCDC7-209ENST00000539197 CAV1Q03135 178 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms