RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 TRIM63Q969Q1 353 aa10.56□□□□□ -0.72
CD9-208ENST00000538834 USMG5Q96IX5 58 aa10.56□□□□□ -0.72
CD9-208ENST00000538834 MS4A10Q96PG2 267 aa10.56□□□□□ -0.72
CD9-208ENST00000538834 FANCD2OSQ96PS1 177 aa10.56□□□□□ -0.72
CD9-208ENST00000538834 SRSF8Q9BRL6 282 aaKnown RBP10.56□□□□□ -0.72
CD9-208ENST00000538834 IGHV4OR15-8A0A075B7B6 117 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 A0A087WW49 117 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 A0A0G2JLM5 398 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 IGLC7A0M8Q6 106 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 FABP12A6NFH5 140 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 MARCH11A6NNE9 402 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 MPPED1O15442 326 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 HSPB1P04792 205 aaKnown RBP10.55□□□□□ -0.72
CD9-208ENST00000538834 OR8U8P0C7N1 319 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 MYOD1P15172 320 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 TPPP2P59282 170 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 KRTAP10-11P60412 298 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 MEF2DQ14814 521 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 SURF2Q15527 256 aaPredicted RBP10.55□□□□□ -0.72
CD9-208ENST00000538834 PHLDA2Q53GA4 152 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 SSX9Q7RTT3 188 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 OR4C16Q8NGL9 310 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 OR13C8Q8NGS7 320 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 RTBDNQ9BSG5 229 aaPredicted RBP10.55□□□□□ -0.72
CD9-208ENST00000538834 TMEM140Q9NV12 185 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 GPR132Q9UNW8 380 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 ZNF257Q9Y2Q1 563 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 DNAH9Q9NYC9 4486 aa10.55□□□□□ -0.72
CD9-208ENST00000538834 HMX3A6NHT5 357 aa10.54□□□□□ -0.72
CD9-208ENST00000538834 IFNA6P05013 189 aa10.54□□□□□ -0.72
CD9-208ENST00000538834 CTSDP07339 412 aaPredicted RBP10.54□□□□□ -0.72
CD9-208ENST00000538834 AKAIN1P0CW23 69 aa10.54□□□□□ -0.72
CD9-208ENST00000538834 CD40LGP29965 261 aa10.54□□□□□ -0.72
CD9-208ENST00000538834 REC114Q7Z4M0 266 aa10.54□□□□□ -0.72
CD9-208ENST00000538834 SLC25A42Q86VD7 318 aa10.54□□□□□ -0.72
CD9-208ENST00000538834 DCUN1D4Q92564 292 aa10.54□□□□□ -0.72
CD9-208ENST00000538834 GPR61Q9BZJ8 451 aa10.54□□□□□ -0.72
CD9-208ENST00000538834 TEX50A0A1B0GTY4 177 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 DPPA5A6NC42 116 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 FAM223BA6NKX1 122 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 LINC01619G3V211 115 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 H0Y980 276 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 ACTL6BO94805 426 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 IGHV3-11P01762 117 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 APELAP0DMC3 54 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 AREGP15514 252 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 RPA2P15927 270 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 PSMB6P28072 239 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 ECI1P42126 302 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 KLF9Q13886 244 aaPredicted RBP10.53□□□□□ -0.72
CD9-208ENST00000538834 THOC7Q6I9Y2 204 aaKnown RBP10.53□□□□□ -0.72
CD9-208ENST00000538834 FAAP20Q6NZ36 180 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 FAM223AQ8IWN6 122 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 GDPD1Q8N9F7 314 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 OR6Q1Q8NGQ2 317 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 MARCH1Q8TCQ1 289 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 DLX4Q92988 240 aaPredicted RBP10.53□□□□□ -0.72
CD9-208ENST00000538834 FYTTD1Q96QD9 318 aaKnown RBP10.53□□□□□ -0.72
CD9-208ENST00000538834 OR5B12Q96R08 314 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 TP53RKQ96S44 253 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 THAP7Q9BT49 309 aaPredicted RBP10.53□□□□□ -0.72
CD9-208ENST00000538834 C5orf66Q9H5L9 145 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 AKIP1Q9NQ31 210 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 NDUFA4L2Q9NRX3 87 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 TMEM14BQ9NUH8 114 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 AURKAIP1Q9NWT8 199 aaPredicted RBP10.53□□□□□ -0.72
CD9-208ENST00000538834 NDUFA13Q9P0J0 144 aa10.53□□□□□ -0.72
CD9-208ENST00000538834 IGLV11-55A0A075B6I3 123 aa10.52□□□□□ -0.73
CD9-208ENST00000538834 DBX1A6NMT0 343 aa10.52□□□□□ -0.73
CD9-208ENST00000538834 KRASP01116 189 aa10.52□□□□□ -0.73
CD9-208ENST00000538834 PI3P19957 117 aa10.52□□□□□ -0.73
CD9-208ENST00000538834 UCP1P25874 307 aa10.52□□□□□ -0.73
CD9-208ENST00000538834 G6PCP35575 357 aa10.52□□□□□ -0.73
CD9-208ENST00000538834 PIGPP57054 158 aa10.52□□□□□ -0.73
CD9-208ENST00000538834 KLF5Q13887 457 aaPredicted RBP10.52□□□□□ -0.73
CD9-208ENST00000538834 ACSM6Q6P461 480 aa10.52□□□□□ -0.73
CD9-208ENST00000538834 NECAP1Q8NC96 275 aa10.52□□□□□ -0.73
CD9-208ENST00000538834 ZFAND1Q8TCF1 268 aa10.52□□□□□ -0.73
CD9-208ENST00000538834 DEDD2Q8WXF8 326 aa10.52□□□□□ -0.73
CD9-208ENST00000538834 PHB2Q99623 299 aa10.52□□□□□ -0.73
CD9-208ENST00000538834 COA4Q9NYJ1 87 aa10.52□□□□□ -0.73
CD9-208ENST00000538834 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.51□□□□□ -0.73
CD9-208ENST00000538834 CCDC160A6NGH7 325 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 B3GALNT1O75752 331 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 IGKV1-5P01602 117 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 TRBV12-3P01733 135 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 PRH1P02810 166 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 S100GP29377 79 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 INSL3P51460 131 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 SLURP1P55000 103 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 RHOGP84095 191 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 WT1-ASQ06250 92 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 AARDQ4LEZ3 155 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 C9orf66Q5T8R8 295 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 IL34Q6ZMJ4 242 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 C19orf35Q6ZS72 473 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 DMBX1Q8NFW5 382 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 OR51S1Q8NGJ8 323 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 OR1L8Q8NGR8 309 aa10.51□□□□□ -0.73
CD9-208ENST00000538834 GLYATL2Q8WU03 294 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms