RNA–Protein interactions for RNA: ENST00000538478.5

LRTOMT-215, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-215ENST00000538478 SIKE1Q9BRV8 207 aa4.41□□□□□ -1.7
LRTOMT-215ENST00000538478 TMEM70Q9BUB7 260 aa4.41□□□□□ -1.7
LRTOMT-215ENST00000538478 MS4A6AQ9H2W1 248 aa4.41□□□□□ -1.7
LRTOMT-215ENST00000538478 EFCAB1Q9HAE3 211 aa4.41□□□□□ -1.7
LRTOMT-215ENST00000538478 SPACA1Q9HBV2 294 aa4.41□□□□□ -1.7
LRTOMT-215ENST00000538478 IGKV1-6A0A0C4DH72 117 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 LINC00473A8K010 186 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 C15orf62A8K5M9 175 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 ZNF705FA8MVS1 300 aaPredicted RBP4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 E9PI62 339 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 DFFBO76075 338 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 CRYZL1O95825 349 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 NAPSAO96009 420 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 APOHP02749 345 aaPredicted RBP4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 HTR1AP08908 422 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 ZNF735P0CB33 412 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 ZNF705DP0CH99 300 aaPredicted RBP4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 ZNF705BP0CI00 300 aaPredicted RBP4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 ZNF93P35789 620 aaPredicted RBP4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 CCL18P55774 89 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 VMA21Q3ZAQ7 101 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 FAM98BQ52LJ0 330 aaKnown RBP4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 TTC32Q5I0X7 151 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 ACTL10Q5JWF8 245 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 DDI2Q5TDH0 399 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 UBE2UQ5VVX9 321 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 TCF24Q7RTU0 167 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 FAM220AQ7Z4H9 259 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 CROCCP2Q86T23 111 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 TMEM116Q8NCL8 245 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 RNF125Q96EQ8 232 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 UHRF2Q96PU4 802 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 PDCD1LG2Q9BQ51 273 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 FNDC4Q9H6D8 234 aaPredicted RBP4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 SDHAF2Q9NX18 166 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 LRRC42Q9Y546 428 aa4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 V9GYY5 206 aaPredicted RBP4.4□□□□□ -1.71
LRTOMT-215ENST00000538478 IGHV3-21A0A0B4J1V1 117 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 NUPL2O15504 423 aaKnown RBP4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 GLAP06280 429 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 GSTT2P0CG29 244 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 GSTT2BP0CG30 244 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 MALP21145 153 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 PTBP1P26599 531 aaKnown RBP eCLIP4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 RPL27AP46776 148 aaKnown RBP4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 HNRNPA3P51991 378 aaKnown RBP4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 OR2B8PP59922 312 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 ERVFC1-1P60608 527 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 BLOC1S1P78537 153 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 CDK10Q15131 360 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 MMD2Q8IY49 270 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 VKORC1L1Q8N0U8 176 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 CXorf58Q96LI9 332 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 ELAC2Q9BQ52 826 aaKnown RBP4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 FAAP24Q9BTP7 215 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 SELENOIQ9C0D9 397 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 FAM212BQ9NTI7 297 aaPredicted RBP4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 SMPD3Q9NY59 655 aaPredicted RBP4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 ABRACLQ9P1F3 81 aa4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 WARS2Q9UGM6 360 aaKnown RBP4.39□□□□□ -1.71
LRTOMT-215ENST00000538478 TRGV11A0A075B6L2 103 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 IGHV3-66A0A0C4DH42 116 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 DPPA5A6NC42 116 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 J3QRE1 110 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 K7EQG2 157 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 SLC16A6O15403 523 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 ZNF780AO75290 641 aaPredicted RBP4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 PDCD6O75340 191 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 ACTL6BO94805 426 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 CD3GP09693 182 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 ZNF688P0C7X2 276 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 HIST1H1BP16401 226 aaKnown RBP4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 MGMTP16455 207 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 SNRPGP62308 76 aaKnown RBP4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 C6orf201Q7Z4U5 140 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 OR6M1Q8NGM8 313 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 DYDC1Q8WWB3 177 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 MUL1Q969V5 352 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 CPNE2Q96FN4 548 aaPredicted RBP4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 OR10C1Q96KK4 312 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 HDHD3Q9BSH5 251 aaPredicted RBP4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 MRGBPQ9NV56 204 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 PAK1IP1Q9NWT1 392 aaPredicted RBP4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 RDH8Q9NYR8 311 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 SLC45A2Q9UMX9 530 aa4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 YTHDF2Q9Y5A9 579 aaKnown RBP4.38□□□□□ -1.71
LRTOMT-215ENST00000538478 IGHV3OR16-12A0A075B7B8 117 aa4.37□□□□□ -1.71
LRTOMT-215ENST00000538478 IGLC7A0M8Q6 106 aa4.37□□□□□ -1.71
LRTOMT-215ENST00000538478 TMEM189A5PLL7 270 aa4.37□□□□□ -1.71
LRTOMT-215ENST00000538478 J3QLW9 94 aa4.37□□□□□ -1.71
LRTOMT-215ENST00000538478 DNASE2O00115 360 aaPredicted RBP4.37□□□□□ -1.71
LRTOMT-215ENST00000538478 RAB27BO00194 218 aa4.37□□□□□ -1.71
LRTOMT-215ENST00000538478 CTSGP08311 255 aa4.37□□□□□ -1.71
LRTOMT-215ENST00000538478 DEFA4P12838 97 aa4.37□□□□□ -1.71
LRTOMT-215ENST00000538478 ZNF19P17023 458 aa4.37□□□□□ -1.71
LRTOMT-215ENST00000538478 ZBTB25P24278 435 aa4.37□□□□□ -1.71
LRTOMT-215ENST00000538478 DUTP33316 252 aaKnown RBP4.37□□□□□ -1.71
LRTOMT-215ENST00000538478 DAD1P61803 113 aa4.37□□□□□ -1.71
LRTOMT-215ENST00000538478 PAFAH1B2P68402 229 aa4.37□□□□□ -1.71
LRTOMT-215ENST00000538478 PLA2G7Q13093 441 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms