RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 ZNF418Q8TF45 676 aaPredicted RBP9.46□□□□□ -0.9
LINC00346-201ENST00000538077 PARLQ9H300 379 aa9.46□□□□□ -0.9
LINC00346-201ENST00000538077 PATJQ8NI35 1801 aa9.46□□□□□ -0.9
LINC00346-201ENST00000538077 PIKFYVEQ9Y2I7 2098 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 TRGV2A0A075B6R0 118 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 C17orf98A8MV24 154 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FHITP49789 147 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 DEFB121Q5J5C9 76 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 OR4D5Q8NGN0 318 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 TRGC2P03986 189 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 IL6RP08887 468 aaPredicted RBP9.45□□□□□ -0.9
LINC00346-201ENST00000538077 GATA2P23769 480 aaPredicted RBP9.45□□□□□ -0.9
LINC00346-201ENST00000538077 NUTF2P61970 127 aaKnown RBP9.45□□□□□ -0.9
LINC00346-201ENST00000538077 IGLV3-21P80748 117 aaPredicted RBP9.45□□□□□ -0.9
LINC00346-201ENST00000538077 TEX45Q8NA69 505 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FOXC2Q99958 501 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 DPM3Q9P2X0 92 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 TNFRSF18Q9Y5U5 241 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 SERF2P84101 59 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 C10orf128Q5T292 105 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 WDR82Q6UXN9 313 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 RAB24Q969Q5 203 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 C18orf15Q96N68 181 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 ASCC3Q8N3C0 2202 aaKnown RBP9.45□□□□□ -0.9
LINC00346-201ENST00000538077 C12orf77C9JDV5 145 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 PSG7Q13046 419 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 CBLN4Q9NTU7 201 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM90A10PA6NDY2 464 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM90A18PA6NE21 464 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM90A16PA6NEW6 464 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM90A20PA6NIJ5 464 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM90A8PA6NJQ4 464 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM90A7PA6NKC0 464 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM90A22PA8MWA6 464 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM90A12PA8MX19 464 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM90A5PA8MXJ8 464 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM90A23PA8MXZ1 464 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 THBDP07204 575 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM90A15PP0C7V4 464 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM90A13PP0C7W8 464 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM90A14PP0C7W9 464 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM90A24PP0C7X0 464 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 RPS11P62280 158 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINC00346-201ENST00000538077 FAM71F2Q6NXP2 309 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 LINC00469Q8N7U9 141 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 RNASE6Q93091 150 aaKnown RBP9.45□□□□□ -0.9
LINC00346-201ENST00000538077 LINC00470Q9BZP3 86 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 WNT10AQ9GZT5 417 aa9.45□□□□□ -0.9
LINC00346-201ENST00000538077 ZFC3H1O60293 1989 aaKnown RBP9.45□□□□□ -0.9
LINC00346-201ENST00000538077 TRAV40A0A0B4J280 105 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 CD1AP06126 327 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 GRIFINA4D1Z8 144 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 FAM74A7A6NL05 159 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 SMIM6P0DI80 62 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 CACNG7P62955 275 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 ZNF345Q14585 488 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 RIPPLY2Q5TAB7 128 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 LEMD1Q68G75 181 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 KIR3DL3Q8N743 410 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 DEPPQ9NTK1 212 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 TOMM7Q9P0U1 55 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 TUBD1Q9UJT1 453 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 TRAV24A0A0B4J272 114 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 TMEM160Q9NX00 188 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 METRNQ9UJH8 293 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 SRIP30626 198 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 MSGN1A6NI15 193 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 C17orf100A8MU93 164 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 ZNF883P0CG24 379 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 FOXF2Q12947 444 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 COX19Q49B96 90 aa9.44□□□□□ -0.9
LINC00346-201ENST00000538077 CGAP01215 116 aa9.43□□□□□ -0.9
LINC00346-201ENST00000538077 LDLRAD2Q5SZI1 272 aa9.43□□□□□ -0.9
LINC00346-201ENST00000538077 ZNF256Q9Y2P7 627 aaPredicted RBP9.43□□□□□ -0.9
LINC00346-201ENST00000538077 HLA-DRB1P01911 266 aa9.43□□□□□ -0.9
LINC00346-201ENST00000538077 BIVMQ86UB2 503 aa9.43□□□□□ -0.9
LINC00346-201ENST00000538077 DEFB104AQ8WTQ1 72 aa9.43□□□□□ -0.9
LINC00346-201ENST00000538077 PEMTQ9UBM1 199 aa9.43□□□□□ -0.9
LINC00346-201ENST00000538077 ASIPP42127 132 aa9.43□□□□□ -0.9
LINC00346-201ENST00000538077 C11orf68Q9H3H3 251 aaKnown RBP9.43□□□□□ -0.9
LINC00346-201ENST00000538077 ZSWIM8A7E2V4 1837 aa9.43□□□□□ -0.9
LINC00346-201ENST00000538077 MEF2BQ02080 365 aaPredicted RBP9.43□□□□□ -0.9
LINC00346-201ENST00000538077 TMEM219Q86XT9 240 aa9.43□□□□□ -0.9
LINC00346-201ENST00000538077 LDLRAD4O15165 306 aa9.43□□□□□ -0.9
LINC00346-201ENST00000538077 GCHFRP30047 84 aa9.43□□□□□ -0.9
LINC00346-201ENST00000538077 KLRD1Q13241 179 aa9.43□□□□□ -0.9
LINC00346-201ENST00000538077 CENPWQ5EE01 88 aa9.43□□□□□ -0.9
LINC00346-201ENST00000538077 LINC01590Q5TEZ4 76 aa9.43□□□□□ -0.9
LINC00346-201ENST00000538077 KBTBD11-OT1A0A1B0GTJ5 212 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 RPS20P60866 119 aaKnown RBP9.42□□□□□ -0.9
LINC00346-201ENST00000538077 C1orf100Q5SVJ3 147 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 SEMA5BQ9P283 1151 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.42□□□□□ -0.9
LINC00346-201ENST00000538077 TDGF1P13385 188 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 SAA2-SAA4A0A096LPE2 208 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 IGHV1-18A0A0C4DH31 117 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 SAA2P0DJI9 122 aaPredicted RBP9.42□□□□□ -0.9
LINC00346-201ENST00000538077 CD59P13987 128 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 PKIAP61925 76 aa9.42□□□□□ -0.9
LINC00346-201ENST00000538077 TMEM170BQ5T4T1 132 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms