RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 EML6Q6ZMW3 1958 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 LOC102723996A0A087X1L8 192 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 A0A1B0GV72 72 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 TLX3O43711 291 aaPredicted RBP8.92□□□□□ -0.98
RTN3-208ENST00000537981 IFI6P09912 130 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 LINC00869P0C866 280 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 MGST1P10620 155 aaKnown RBP8.92□□□□□ -0.98
RTN3-208ENST00000537981 CKS1BP61024 79 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 ACP7Q6ZNF0 438 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.92□□□□□ -0.98
RTN3-208ENST00000537981 KCNIP2Q9NS61 270 aa8.92□□□□□ -0.98
RTN3-208ENST00000537981 C19orf25Q9UFG5 118 aaPredicted RBP8.92□□□□□ -0.98
RTN3-208ENST00000537981 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.91□□□□□ -0.98
RTN3-208ENST00000537981 LRP5LA4QPB2 252 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 HSBP1O75506 76 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 CGAP01215 116 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 IGLV2-14P01704 120 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 CELA2BP08218 269 aaPredicted RBP8.91□□□□□ -0.98
RTN3-208ENST00000537981 COX5AP20674 150 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 RPL24P83731 157 aaKnown RBP8.91□□□□□ -0.98
RTN3-208ENST00000537981 MALLQ13021 153 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 FAM120AOSQ5T036 256 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 SLC25A34Q6PIV7 304 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 C2orf91Q6ZV80 131 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 NEU4Q8WWR8 484 aaPredicted RBP8.91□□□□□ -0.98
RTN3-208ENST00000537981 FAM168AQ92567 244 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 NPFFR1Q9GZQ6 430 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 OR2D2Q9H210 308 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 TSSC4Q9Y5U2 329 aaPredicted RBP8.91□□□□□ -0.98
RTN3-208ENST00000537981 DYSFO75923 2080 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 NCKAP5O14513 1909 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 F8WDY8 70 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 DRD1P21728 446 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 ZNF585BQ52M93 769 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 SLC35E4Q6ICL7 350 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 TMEM14EPQ6UXP3 125 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 SPACA3Q8IXA5 215 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 OR13H1Q8NG92 308 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 PP6455Q8WZ26 134 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 COMMD5Q9GZQ3 224 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 HIF1ANQ9NWT6 349 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 DKK4Q9UBT3 224 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 OR51B2Q9Y5P1 312 aa8.91□□□□□ -0.98
RTN3-208ENST00000537981 PMS2P5A8MQ11 134 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.9□□□□□ -0.98
RTN3-208ENST00000537981 REG1AP05451 166 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 SLC25A6P12236 298 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 PLP1P60201 277 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 CX3CL1P78423 397 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 PLCXD2Q0VAA5 305 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 VWC2Q2TAL6 325 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 FAM69BQ5VUD6 431 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 SPATA31B1PQ5VZV4 182 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 PCSK4Q6UW60 755 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 FAM222BQ8WU58 562 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 TMEM45BQ96B21 275 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 ZNF837Q96EG3 531 aaPredicted RBP8.9□□□□□ -0.98
RTN3-208ENST00000537981 C5orf30Q96GV9 206 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 C19orf24Q9BVV8 132 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 SSBP3Q9BWW4 388 aaPredicted RBP8.9□□□□□ -0.98
RTN3-208ENST00000537981 SCRT2Q9NQ03 307 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 TNFRSF19Q9NS68 423 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 OR1A1Q9P1Q5 309 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 F5P12259 2224 aa8.9□□□□□ -0.98
RTN3-208ENST00000537981 ZG16O60844 167 aa8.9□□□□□ -0.99
RTN3-208ENST00000537981 TNFSF15O95150 251 aa8.9□□□□□ -0.99
RTN3-208ENST00000537981 CD27P26842 260 aa8.9□□□□□ -0.99
RTN3-208ENST00000537981 RBM11P57052 281 aaKnown RBP8.9□□□□□ -0.99
RTN3-208ENST00000537981 ZNF542PQ5EBM4 170 aa8.9□□□□□ -0.99
RTN3-208ENST00000537981 SLC25A47Q6Q0C1 308 aa8.9□□□□□ -0.99
RTN3-208ENST00000537981 RBPMS2Q6ZRY4 209 aaKnown RBP8.9□□□□□ -0.99
RTN3-208ENST00000537981 SPSB1Q96BD6 273 aa8.9□□□□□ -0.99
RTN3-208ENST00000537981 TIMM9Q9Y5J7 89 aa8.9□□□□□ -0.99
RTN3-208ENST00000537981 HS3ST3A1Q9Y663 406 aa8.9□□□□□ -0.99
RTN3-208ENST00000537981 TANC2Q9HCD6 1990 aa8.9□□□□□ -0.99
RTN3-208ENST00000537981 FER1L5A0AVI2 2057 aa8.9□□□□□ -0.99
RTN3-208ENST00000537981 DMDP11532 3685 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 ZFHX4Q86UP3 3567 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 FOXH1O75593 365 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 NRN1LQ496H8 165 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 KHDC1LQ5JSQ8 128 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 TMEM211Q6ICI0 200 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 FAM53AQ6NSI3 398 aaPredicted RBP8.89□□□□□ -0.99
RTN3-208ENST00000537981 IL1F10Q8WWZ1 152 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 SDK2Q58EX2 2172 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 K7EP34 96 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 APCSP02743 223 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 PATE4P0C8F1 98 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 CCL2P13500 99 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 MSR1P21757 451 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 GUCA1AP43080 201 aaPredicted RBP8.89□□□□□ -0.99
RTN3-208ENST00000537981 CST6Q15828 149 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 C12orf54Q6X4T0 127 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 TMEM116Q8NCL8 245 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 BORCS8Q96FH0 119 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 SIGMAR1Q99720 223 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 ASXL3Q9C0F0 2248 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 TTC28Q96AY4 2481 aa8.89□□□□□ -0.99
RTN3-208ENST00000537981 A0A0J9YY10 115 aa8.88□□□□□ -0.99
RTN3-208ENST00000537981 FRG2CA6NGY1 282 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms