RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 Q9HAA7 133 aa3.69□□□□□ -1.82
CLIP1-207ENST00000536634 TMBIM4Q9HC24 238 aa3.69□□□□□ -1.82
CLIP1-207ENST00000536634 EXOSC4Q9NPD3 245 aaKnown RBP3.69□□□□□ -1.82
CLIP1-207ENST00000536634 CMC2Q9NRP2 79 aa3.69□□□□□ -1.82
CLIP1-207ENST00000536634 CALYQ9NYX4 217 aa3.69□□□□□ -1.82
CLIP1-207ENST00000536634 SIGLEC8Q9NYZ4 499 aa3.69□□□□□ -1.82
CLIP1-207ENST00000536634 IDI2-AS1Q9NZ38 188 aa3.69□□□□□ -1.82
CLIP1-207ENST00000536634 NUFIP1Q9UHK0 495 aaKnown RBP3.69□□□□□ -1.82
CLIP1-207ENST00000536634 COPS3Q9UNS2 423 aa3.69□□□□□ -1.82
CLIP1-207ENST00000536634 GSTK1Q9Y2Q3 226 aa3.69□□□□□ -1.82
CLIP1-207ENST00000536634 CHTOPQ9Y3Y2 248 aaKnown RBP3.69□□□□□ -1.82
CLIP1-207ENST00000536634 TRAV39A0A0B4J263 110 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 IGKV1-12A0A0C4DH73 117 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 C13orf42A0A1B0GVH6 325 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 RIIAD1A6NNX1 92 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 SLC31A2O15432 143 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 MAGEB4O15481 346 aaPredicted RBP3.68□□□□□ -1.82
CLIP1-207ENST00000536634 IFNGP01579 166 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 IGKV1D-12P01611 117 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 GAPDHP04406 335 aaKnown RBP3.68□□□□□ -1.82
CLIP1-207ENST00000536634 CSN2P05814 226 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 CD7P09564 240 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 CD1BP29016 333 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 HTR1FP30939 366 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 SSTR5P35346 364 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 IFNGR2P38484 337 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 RPL5P46777 297 aaKnown RBP3.68□□□□□ -1.82
CLIP1-207ENST00000536634 MEOX2P50222 304 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 CXCL6P80162 114 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 PPP1R8Q12972 351 aaKnown RBP3.68□□□□□ -1.82
CLIP1-207ENST00000536634 KRTAP13-3Q3SY46 172 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 SPIN3Q5JUX0 258 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 SAMD4BQ5PRF9 694 aaKnown RBP3.68□□□□□ -1.82
CLIP1-207ENST00000536634 TMEM179BQ7Z7N9 219 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 ENTHD1Q8IYW4 607 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 CENPSQ8N2Z9 138 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 OR2T33Q8NG76 320 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 OR9G4Q8NGQ1 327 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 UBALD1Q8TB05 177 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 RTN4IP1Q8WWV3 396 aaPredicted RBP3.68□□□□□ -1.82
CLIP1-207ENST00000536634 RGP1Q92546 391 aaPredicted RBP3.68□□□□□ -1.82
CLIP1-207ENST00000536634 CYYR1Q96J86 154 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 CXorf58Q96LI9 332 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 SPACA5Q96QH8 159 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 MBOAT4Q96T53 435 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 ZNF184Q99676 751 aaPredicted RBP3.68□□□□□ -1.82
CLIP1-207ENST00000536634 KCTD14Q9BQ13 255 aaPredicted RBP3.68□□□□□ -1.82
CLIP1-207ENST00000536634 C6orf62Q9GZU0 229 aaPredicted RBP3.68□□□□□ -1.82
CLIP1-207ENST00000536634 COMMD4Q9H0A8 199 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 LINC00574Q9H8X3 128 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 ADGRL4Q9HBW9 690 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 HMG20AQ9NP66 347 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 SAR1AQ9NR31 198 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 ENOPH1Q9UHY7 261 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 GLS2Q9UI32 602 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 KIF25Q9UIL4 384 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 DIMT1Q9UNQ2 313 aaKnown RBP3.68□□□□□ -1.82
CLIP1-207ENST00000536634 ERGIC3Q9Y282 383 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 CBY1Q9Y3M2 126 aa3.68□□□□□ -1.82
CLIP1-207ENST00000536634 MEIKINA0A087WXM9 373 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 IGKV1-9A0A0C4DH69 117 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 ZNF98A6NK75 572 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 DHRS7CA6NNS2 312 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 LOC110117498-PIK3R3F6TDL0 507 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 H0Y980 276 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 SH2D1BO14796 132 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 CCDC22O60826 627 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 SULT1C4O75897 302 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 CNIH1O95406 144 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 HLA-DRB1P01911 266 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 MRPL3P09001 348 aaKnown RBP3.67□□□□□ -1.82
CLIP1-207ENST00000536634 ZNF44P15621 663 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 CCL1P22362 96 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 SLC2A5P22732 501 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 TALDO1P37837 337 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 MFAP2P55001 183 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 SYNJ2BPP57105 145 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 SMIM11AP58511 58 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 RAB14P61106 215 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 RAB40BQ12829 278 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 CDK5R1Q15078 307 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 MMDQ15546 238 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 LRRC36Q1X8D7 754 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 ZNF829Q3KNS6 432 aaPredicted RBP3.67□□□□□ -1.82
CLIP1-207ENST00000536634 KCTD21Q4G0X4 260 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 LCE3AQ5TA76 89 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 BCL2L15Q5TBC7 163 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 GLYATQ6IB77 296 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 DEGS2Q6QHC5 323 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 ARPINQ7Z6K5 226 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 Q8IYB0 196 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 ZNF679Q8IYX0 411 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 YIPF7Q8N8F6 280 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 OR51T1Q8NGJ9 327 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 FLYWCH2Q96CP2 140 aaKnown RBP3.67□□□□□ -1.82
CLIP1-207ENST00000536634 BORCS8Q96FH0 119 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 ANKRD60Q9BZ19 345 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 CHST5Q9GZS9 411 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 OR52A1Q9UKL2 312 aa3.67□□□□□ -1.82
CLIP1-207ENST00000536634 SAMD4AQ9UPU9 718 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms