RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MRGPRFQ96AM1 343 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 DIRAS2Q96HU8 199 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 NXF2Q9GZY0 626 aaKnown RBP10.11□□□□□ -0.79
PRKDC-206ENST00000536429 RBM38Q9H0Z9 239 aaKnown RBP10.11□□□□□ -0.79
PRKDC-206ENST00000536429 COMMD9Q9P000 198 aa10.11□□□□□ -0.79
PRKDC-206ENST00000536429 HUWE1Q7Z6Z7 4374 aaKnown RBP10.1□□□□□ -0.79
PRKDC-206ENST00000536429 MARCH11A6NNE9 402 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 NPIPB5A8MRT5 1133 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 OR2J3O76001 311 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 KRASP01116 189 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 IGKV1-39P01597 117 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 IGKV1D-39P04432 117 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 G6PCP35575 357 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 UCP3P55916 312 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 IL18Q14116 193 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 SLC38A6Q8IZM9 456 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 DMBX1Q8NFW5 382 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 SMIM4Q8WVI0 70 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 USMG5Q96IX5 58 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 FANCD2OSQ96PS1 177 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 PRR25Q96S07 402 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 RANGRFQ9HD47 186 aaPredicted RBP10.1□□□□□ -0.79
PRKDC-206ENST00000536429 SLC2A9Q9NRM0 540 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 NSG2Q9Y328 171 aa10.1□□□□□ -0.79
PRKDC-206ENST00000536429 IGLC7A0M8Q6 106 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 CCDC160A6NGH7 325 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 DBX1A6NMT0 343 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 RAB3DO95716 219 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 IFNA6P05013 189 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 CRYGCP07315 174 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 PGAM2P15259 253 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 CTRB1P17538 263 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 PSMB6P28072 239 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 TNFSF8P32971 234 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 ECI1P42126 302 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 PPP5CP53041 499 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 TAS2R19P59542 299 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 CTRB2Q6GPI1 263 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 STEAP1BQ6NZ63 245 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 HAPLN4Q86UW8 402 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 ARRDC1Q8N5I2 433 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 OR10W1Q8NGF6 305 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 MCFD2Q8NI22 146 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 C15orf40Q8WUR7 153 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 SOSTQ9BQB4 213 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 AIFM2Q9BRQ8 373 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 PEF1Q9UBV8 284 aaKnown RBP10.09□□□□□ -0.79
PRKDC-206ENST00000536429 ZNF257Q9Y2Q1 563 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 DMRT1Q9Y5R6 373 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 S4R3C0 116 aa10.09□□□□□ -0.79
PRKDC-206ENST00000536429 DPPA5A6NC42 116 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 FAM223BA6NKX1 122 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 CTDSPLO15194 276 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 SAP30O75446 220 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 NDUFB8O95169 186 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 IGHV3-23P01764 117 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 TBPP20226 339 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 ERVK-16P61578 105 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 MRPS10P82664 201 aaKnown RBP10.08□□□□□ -0.8
PRKDC-206ENST00000536429 ATP5G2Q06055 141 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 EXOSC2Q13868 293 aaKnown RBP10.08□□□□□ -0.8
PRKDC-206ENST00000536429 KLF5Q13887 457 aaPredicted RBP10.08□□□□□ -0.8
PRKDC-206ENST00000536429 C15orf32Q32M92 178 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 SCGB2B2Q4G0G5 96 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 LPCAT3Q6P1A2 487 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 ACSM6Q6P461 480 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 SLC25A42Q86VD7 318 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 FAM223AQ8IWN6 122 aa10.08□□□□□ -0.8
PRKDC-206ENST00000536429 TEX50A0A1B0GTY4 177 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 BMPR1BO00238 502 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 PIGPP57054 158 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 SYNJ2BPP57105 145 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 RND3P61587 244 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 DEFB121Q5J5C9 76 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 IL34Q6ZMJ4 242 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 NECAP1Q8NC96 275 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 OR4C16Q8NGL9 310 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 OR13C8Q8NGS7 320 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 TERB2Q8NHR7 220 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 MARCH1Q8TCQ1 289 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 SEC22AQ96IW7 307 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 TP53RKQ96S44 253 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 QTRT1Q9BXR0 403 aaKnown RBP10.07□□□□□ -0.8
PRKDC-206ENST00000536429 COMMD5Q9GZQ3 224 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 FBXL7Q9UJT9 491 aa10.07□□□□□ -0.8
PRKDC-206ENST00000536429 IGLV11-55A0A075B6I3 123 aa10.06□□□□□ -0.8
PRKDC-206ENST00000536429 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.06□□□□□ -0.8
PRKDC-206ENST00000536429 PPP5D1E7EU14 171 aa10.06□□□□□ -0.8
PRKDC-206ENST00000536429 GSTZ1O43708 216 aaPredicted RBP10.06□□□□□ -0.8
PRKDC-206ENST00000536429 HLA-AP01891 365 aaKnown RBP10.06□□□□□ -0.8
PRKDC-206ENST00000536429 ZP3P21754 424 aa10.06□□□□□ -0.8
PRKDC-206ENST00000536429 S100GP29377 79 aa10.06□□□□□ -0.8
PRKDC-206ENST00000536429 SSBP1Q04837 148 aaKnown RBP10.06□□□□□ -0.8
PRKDC-206ENST00000536429 WT1-ASQ06250 92 aa10.06□□□□□ -0.8
PRKDC-206ENST00000536429 IZUMO4Q1ZYL8 232 aa10.06□□□□□ -0.8
PRKDC-206ENST00000536429 KLK9Q2XQG4 91 aa10.06□□□□□ -0.8
PRKDC-206ENST00000536429 SP6Q3SY56 376 aa10.06□□□□□ -0.8
PRKDC-206ENST00000536429 ZNF429Q86V71 674 aa10.06□□□□□ -0.8
PRKDC-206ENST00000536429 RSL24D1Q9UHA3 163 aaKnown RBP10.06□□□□□ -0.8
PRKDC-206ENST00000536429 KLK9Q9UKQ9 250 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms