RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 RBM11P57052 281 aaKnown RBP6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 CLINT1Q14677 625 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 AKR1C8PQ5T2L2 129 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 TMEM268Q5VZI3 342 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 CCDC144NLQ6NUI1 221 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 ASCL4Q6XD76 172 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 OSR2Q8N2R0 312 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 FAM24BQ8N5W8 94 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 SUMF2Q8NBJ7 301 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 RFESDQ8TAC1 157 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 WIPF2Q8TF74 440 aaPredicted RBP6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 TOMM40LQ969M1 308 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 BSCL2Q96G97 398 aaPredicted RBP6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 GFI1Q99684 422 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 SLC35B3Q9H1N7 401 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 ARV1Q9H2C2 271 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 HRH4Q9H3N8 390 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 IL36GQ9NZH8 169 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 CKLFQ9UBR5 152 aa6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 STRAPQ9Y3F4 350 aaKnown RBP6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 AMMECR1Q9Y4X0 333 aaPredicted RBP6.82□□□□□ -1.32
SFSWAP-202ENST00000535202 TRBV5-5A0A0J9YX44 114 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 A0A1W2PP11 408 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 A0A1W2PPK0 400 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 TMEM30CPA0ZSE6 113 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 ADARB2-AS1A8MUL3 147 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 OOSP1A8MZH6 123 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 LY6LH3BQJ8 138 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 J3QR06 171 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 M0R036 132 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 GEMIN2O14893 280 aaKnown RBP6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 JTBO76095 146 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 CGB3P0DN86 165 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 CGB7P0DN87 165 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 PGAM2P15259 253 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 IGFBP3P17936 291 aaPredicted RBP6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 CHATP28329 748 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 SNCAP37840 140 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 LPAR6P43657 344 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 CLDN12P56749 244 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 C21orf62-AS1Q17RA5 79 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 BEAN1Q3B7T3 259 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 Q499Y3 187 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 SLC22A6Q4U2R8 563 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 ACTBL2Q562R1 376 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 SAMD5Q5TGI4 173 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 CENPVQ7Z7K6 275 aaPredicted RBP6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 LINC00596Q86U02 117 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 Q8NFD4 153 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 OR4F17Q8NGA8 305 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 OR5AU1Q8NGC0 362 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 NEK7Q8TDX7 302 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 DCUN1D4Q92564 292 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 PTX4Q96A99 478 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 PACRGQ96M98 296 aaPredicted RBP6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 OR14A2Q96R54 314 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 OR4F4Q96R69 305 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 TMEM208Q9BTX3 173 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 SCRT1Q9BWW7 348 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 TMEM231Q9H6L2 316 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 FAM212BQ9NTI7 297 aaPredicted RBP6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 TMEM242Q9NWH2 141 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 STEAP1Q9UHE8 339 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 PSG11Q9UQ72 335 aa6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 PRKDCP78527 4128 aaKnown RBP6.81□□□□□ -1.32
SFSWAP-202ENST00000535202 TRAV8-7A0A075B6U6 113 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 TRBV5-7A0A0A0MS05 114 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 UMAD1C9J7I0 102 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 NPIPB11E5RHQ5 1161 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 RAB27BO00194 218 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 PIN1P1O15428 100 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 HIST1H2BKO60814 126 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 HLA-AP01891 365 aaKnown RBP6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 PRB2P02812 416 aaPredicted RBP6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 MAS1P04201 325 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 RPLP1P05386 114 aaKnown RBP6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 HIST1H2BJP06899 126 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 ZNF735P0CB33 412 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 FAM106CPP0CH98 169 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 OR5H8P0DN80 308 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 PF4V1P10720 104 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 CD37P11049 281 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 ZNF25P17030 456 aaPredicted RBP6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 TMEM11P17152 192 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 FSTP19883 344 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 HIST1H2BOP23527 126 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 HIST1H2BBP33778 126 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 CDKN1BP46527 198 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 RPS10P46783 165 aaKnown RBP6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 HIST1H2BDP58876 126 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 ERVFC1-1P60608 527 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 HIST1H2BCP62807 126 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 PAX5Q02548 391 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 DIAPH2-AS1Q14236 149 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 HES1Q14469 280 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 GUK1Q16774 197 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 HIST2H2BEQ16778 126 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 MPV17LQ2QL34 196 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 AKIRIN2Q53H80 203 aa6.8□□□□□ -1.32
SFSWAP-202ENST00000535202 KHDC1LQ5JSQ8 128 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms