RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 COX5BP10606 129 aa13.27□□□□□ -0.29
MCF2L-232ENST00000535094 PCP4P48539 62 aa13.27□□□□□ -0.29
MCF2L-232ENST00000535094 KRTCAP3Q53RY4 240 aa13.27□□□□□ -0.29
MCF2L-232ENST00000535094 RNASEKQ6P5S7 137 aaKnown RBP13.27□□□□□ -0.29
MCF2L-232ENST00000535094 FOXJ2Q9P0K8 574 aa13.27□□□□□ -0.29
MCF2L-232ENST00000535094 TBL2Q9Y4P3 447 aaKnown RBP13.27□□□□□ -0.29
MCF2L-232ENST00000535094 NPY1RP25929 384 aa13.27□□□□□ -0.29
MCF2L-232ENST00000535094 GCHFRP30047 84 aa13.27□□□□□ -0.29
MCF2L-232ENST00000535094 Q56UQ5 140 aa13.27□□□□□ -0.29
MCF2L-232ENST00000535094 FAM201AQ5SY85 155 aa13.27□□□□□ -0.29
MCF2L-232ENST00000535094 DHRS13Q6UX07 377 aa13.27□□□□□ -0.29
MCF2L-232ENST00000535094 SH2D2AQ9NP31 389 aa13.27□□□□□ -0.29
MCF2L-232ENST00000535094 PILRBQ9UKJ0 227 aa13.27□□□□□ -0.29
MCF2L-232ENST00000535094 PLXNB1O43157 2135 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 Q6ZWC4 215 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 STPG3Q8N7X2 389 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 DIRC2Q96SL1 478 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 ATG2AQ2TAZ0 1938 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 C15orf62A8K5M9 175 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 PLAUP00749 431 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 CENPWQ5EE01 88 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 TEPPQ6URK8 271 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 PPP1R35Q8TAP8 253 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 RND1Q92730 232 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 TMEM45BQ96B21 275 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 TMEM140Q9NV12 185 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 SRSF7Q16629 238 aaKnown RBP eCLIP13.26□□□□□ -0.29
MCF2L-232ENST00000535094 DCAF10Q5QP82 559 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 ARRDC1-AS1Q9H2J1 176 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 CBY1Q9Y3M2 126 aa13.26□□□□□ -0.29
MCF2L-232ENST00000535094 APC2O95996 2303 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 IGFBP2P18065 325 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 BRS3P32247 399 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 FOXF2Q12947 444 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 TRAT1Q6PIZ9 186 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 TREML4Q6UXN2 200 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 ZBTB34Q8NCN2 500 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 PYGO2Q9BRQ0 406 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 LINC00470Q9BZP3 86 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 NPVFQ9HCQ7 196 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 TCF19Q9Y242 345 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 WDR83OSQ9Y284 106 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 YTHDF2Q9Y5A9 579 aaKnown RBP13.25□□□□□ -0.29
MCF2L-232ENST00000535094 C10orf142B7Z368 130 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 SMPD2O60906 423 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 IL6RP08887 468 aaPredicted RBP13.25□□□□□ -0.29
MCF2L-232ENST00000535094 OR5G3P0C626 314 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 MIR17HGQ75NE6 70 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 M0QZK8 103 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 PRB4P10163 310 aaPredicted RBP13.25□□□□□ -0.29
MCF2L-232ENST00000535094 PAFAH1B2P68402 229 aa13.25□□□□□ -0.29
MCF2L-232ENST00000535094 TRBV20OR9-2A0A075B6H5 130 aa13.24□□□□□ -0.29
MCF2L-232ENST00000535094 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-232ENST00000535094 RAB7AP51149 207 aa13.24□□□□□ -0.29
MCF2L-232ENST00000535094 TRA2AQ13595 282 aaKnown RBP eCLIP13.24□□□□□ -0.29
MCF2L-232ENST00000535094 MIEN1Q9BRT3 115 aa13.24□□□□□ -0.29
MCF2L-232ENST00000535094 KLF13Q9Y2Y9 288 aaPredicted RBP13.24□□□□□ -0.29
MCF2L-232ENST00000535094 C20orf202A1L168 122 aa13.24□□□□□ -0.29
MCF2L-232ENST00000535094 CHRNB4P30926 498 aa13.24□□□□□ -0.29
MCF2L-232ENST00000535094 PRDX2P32119 198 aa13.24□□□□□ -0.29
MCF2L-232ENST00000535094 ZNF718Q3SXZ3 478 aa13.24□□□□□ -0.29
MCF2L-232ENST00000535094 COL5A1-AS1Q5SY13 56 aa13.24□□□□□ -0.29
MCF2L-232ENST00000535094 Q8NFD4 153 aa13.24□□□□□ -0.29
MCF2L-232ENST00000535094 NEU1Q99519 415 aa13.24□□□□□ -0.29
MCF2L-232ENST00000535094 DNAJC4Q9NNZ3 241 aa13.24□□□□□ -0.29
MCF2L-232ENST00000535094 WIPI2Q9Y4P8 454 aa13.24□□□□□ -0.29
MCF2L-232ENST00000535094 DLEU1O43261 78 aa13.24□□□□□ -0.29
MCF2L-232ENST00000535094 APELAP0DMC3 54 aa13.24□□□□□ -0.29
MCF2L-232ENST00000535094 USF1P22415 310 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-232ENST00000535094 MFAP2P55001 183 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 DNLZQ5SXM8 178 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 LCN12Q6JVE5 192 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 MOB3BQ86TA1 216 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 ST6GALNAC6Q969X2 333 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 GNB4Q9HAV0 340 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 IL36BQ9NZH7 164 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 LOC102724200A0A096LPH7 203 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-232ENST00000535094 VAMP3Q15836 100 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 SLC24A4Q8NFF2 622 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 COQ2Q96H96 371 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 MGST2Q99735 147 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 GGTLC1Q9BX51 225 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 ARL2-SNX15V9GYD0 113 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 EXPH5Q8NEV8 1989 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 TNFSF15O95150 251 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 Q6ZVH6 145 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 BLNKQ8WV28 456 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 BCL2L2Q92843 193 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-232ENST00000535094 RNF24Q9Y225 148 aa13.23□□□□□ -0.29
MCF2L-232ENST00000535094 NRN1Q9NPD7 142 aa13.22□□□□□ -0.29
MCF2L-232ENST00000535094 ZNF83P51522 516 aa13.22□□□□□ -0.29
MCF2L-232ENST00000535094 LHFPL4Q7Z7J7 247 aa13.22□□□□□ -0.29
MCF2L-232ENST00000535094 CXXC4Q9H2H0 198 aa13.22□□□□□ -0.29
MCF2L-232ENST00000535094 PCNX2A6NKB5 2137 aa13.22□□□□□ -0.29
MCF2L-232ENST00000535094 TRBV6-6A0A0A6YYG2 114 aa13.22□□□□□ -0.29
MCF2L-232ENST00000535094 CA2P00918 260 aa13.22□□□□□ -0.29
MCF2L-232ENST00000535094 SP1P08047 785 aa13.22□□□□□ -0.29
MCF2L-232ENST00000535094 GPR6P46095 362 aaPredicted RBP13.22□□□□□ -0.29
MCF2L-232ENST00000535094 REG1BP48304 166 aa13.22□□□□□ -0.29
MCF2L-232ENST00000535094 COA6Q5JTJ3 125 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms