RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 A0A0G2JMM0 328 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 A0A1W2PPB8 328 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 PRSS37A4D1T9 235 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 C17orf51A8MQB3 221 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 KIR3DP1A8MWS1 328 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 C17orf112F2Z3M2 114 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 H3BP45 60 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 K7EN84 100 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 M0R1X1 148 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 SIRPB1O00241 398 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 PLPP3O14495 311 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 WNT9BO14905 357 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 PHF1O43189 567 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-216ENST00000534389 PRKNO60260 465 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-216ENST00000534389 NDUFS7O75251 213 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 DUSP11O75319 330 aaKnown RBP2.61□□□□□ -1.99
CSDE1-216ENST00000534389 S1PR2O95136 353 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 VENTXO95231 258 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 CLDN14O95500 239 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 MT-CO2P00403 227 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 TNFP01375 233 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 SERPINE2P07093 398 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 LIPFP07098 398 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 OR10J4P0C629 311 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 SLC35E2P0CK97 266 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 VPREB1P12018 145 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 DEFA4P12838 97 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 ZNF10P21506 573 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-216ENST00000534389 NPY1RP25929 384 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 PTGDSP41222 190 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 ATP5G3P48201 142 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 FXYD4P59646 89 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 SEC61BP60468 96 aaKnown RBP2.61□□□□□ -1.99
CSDE1-216ENST00000534389 HTD2P86397 168 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 PRDX1Q06830 199 aaKnown RBP2.61□□□□□ -1.99
CSDE1-216ENST00000534389 PLCXD2Q0VAA5 305 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 TNXAQ16473 311 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 ACKR1Q16570 336 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 CCL15Q16663 113 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 Q56UQ5 140 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 TCTEX1D4Q5JR98 221 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 ZNF324BQ6AW86 544 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-216ENST00000534389 HIST2H2BCQ6DN03 193 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 HIST2H2BDQ6DRA6 164 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 KCNIP4Q6PIL6 250 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 FOXI2Q6ZQN5 318 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 C19orf35Q6ZS72 473 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 OR8I2Q8N0Y5 310 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 ZNF611Q8N823 705 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 CDRT4Q8N9R6 151 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 GATSQ8NAP1 163 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 OR51T1Q8NGJ9 327 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 OCC1Q8TAD7 63 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 OR51E1Q8TCB6 317 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 C18orf32Q8TCD1 76 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 RNF133Q8WVZ7 376 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 NAT6Q93015 286 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 GMPPAQ96IJ6 420 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-216ENST00000534389 ABHD14BQ96IU4 210 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 FER1L6-AS2Q96M78 137 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 PSMG3Q9BT73 122 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-216ENST00000534389 ULBP2Q9BZM5 246 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 COMMD5Q9GZQ3 224 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 PBOV1Q9GZY1 135 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 TMEM222Q9H0R3 208 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 S1PR5Q9H228 398 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 GEMIN7Q9H840 131 aaKnown RBP2.61□□□□□ -1.99
CSDE1-216ENST00000534389 SLC25A22Q9H936 323 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 ZNF286AQ9HBT8 521 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 SCRT2Q9NQ03 307 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 SPANXB1Q9NS25 103 aaPredicted RBP2.61□□□□□ -1.99
CSDE1-216ENST00000534389 TECRQ9NZ01 308 aaKnown RBP2.61□□□□□ -1.99
CSDE1-216ENST00000534389 IL36BQ9NZH7 164 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 C1RLQ9NZP8 487 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 PEF1Q9UBV8 284 aaKnown RBP2.61□□□□□ -1.99
CSDE1-216ENST00000534389 TBC1D29Q9UFV1 150 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 ANXA10Q9UJ72 324 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 PSG8Q9UQ74 426 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 HS3ST2Q9Y278 367 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 SLC17A4Q9Y2C5 497 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 HEBP2Q9Y5Z4 205 aa2.61□□□□□ -1.99
CSDE1-216ENST00000534389 ARHGAP21Q5T5U3 1957 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 TRAV9-1A0A075B6T8 112 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 IGKV1D-13A0A0B4J2D9 117 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 TRBV7-9A0A0J9YWB2 115 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 C3orf85A0A1B0GTC6 90 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 EDDM13A0A1B0GTR0 161 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 C7orf71A4D174 169 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 SLC22A20A6NK97 555 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 OR11H12B2RN74 326 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 ZNF878C9JN71 531 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 C11orf98E9PRG8 122 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 H3BRM9 83 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 H3BUT2 72 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 SIVA1O15304 175 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 IFNA1P01562 189 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 IFNA5P01569 189 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 CA3P07451 260 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 SMIM17P0DL12 118 aa2.6□□□□□ -1.99
CSDE1-216ENST00000534389 IGHV4-30-4P0DP06 118 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms