RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 DRAM1Q8N682 238 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 ZNF645Q8N7E2 425 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 ZBTB34Q8NCN2 500 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 WFDC11Q8NEX6 87 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 OR11H6Q8NGC7 330 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 OR5M8Q8NGP6 311 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 OR9G1Q8NH87 305 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 DCUN1D4Q92564 292 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 ST6GALNAC6Q969X2 333 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 MALSU1Q96EH3 234 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 FAHD2AQ96GK7 314 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 ABHD14BQ96IU4 210 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 TMEM68Q96MH6 324 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 TBX15Q96SF7 602 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 ABHD14AQ9BUJ0 271 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 METTL8Q9H825 291 aaKnown RBP4.97□□□□□ -1.61
CMTM1-220ENST00000534143 LPAR2Q9HBW0 351 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 SIRT7Q9NRC8 400 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 ONECUT1Q9UBC0 465 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 RNF150Q9ULK6 438 aa4.97□□□□□ -1.61
CMTM1-220ENST00000534143 C14orf166Q9Y224 244 aaKnown RBP4.97□□□□□ -1.61
CMTM1-220ENST00000534143 SETD2Q9BYW2 2564 aaPredicted RBP4.97□□□□□ -1.61
CMTM1-220ENST00000534143 DNHD1Q96M86 4753 aa4.96□□□□□ -1.61
CMTM1-220ENST00000534143 IGHV2-26A0A0B4J1V2 119 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 C9orf170A2RU37 121 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 C5orf51A6NDU8 294 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 CRYM-AS1A6NIL9 109 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 ODF3BA8MYP8 253 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 RNASEK-C17orf49H0YIS7 233 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 LY6LH3BQJ8 138 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 HSD17B6O14756 317 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 RAB29O14966 203 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 TCAPO15273 167 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 MPPED1O15442 326 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 CLN5O75503 358 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 TOX4O94842 621 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 OR4E1P0C645 316 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 SFTA3P0C7M3 94 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 RAB5AP20339 215 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 GATA3P23771 443 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 GNG10P50151 68 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 CAV2P51636 162 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 ZNF137PP52743 207 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 PRRX1P54821 245 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 F2RL1P55085 397 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 PIGPP57054 158 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 PRB3Q04118 309 aaPredicted RBP4.96□□□□□ -1.62
CMTM1-220ENST00000534143 SRSF4Q08170 494 aaKnown RBP4.96□□□□□ -1.62
CMTM1-220ENST00000534143 PPP1R1AQ13522 171 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 KIAA0141Q14154 515 aaPredicted RBP4.96□□□□□ -1.62
CMTM1-220ENST00000534143 TMEM249Q2WGJ8 235 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 HLA-DRB5Q30154 266 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 TMEM128Q5BJH2 165 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 BTNL3Q6UXE8 466 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 SPNS3Q6ZMD2 512 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 KCTD9Q7L273 389 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 VMO1Q7Z5L0 202 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 TMED4Q7Z7H5 227 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 LYG2Q86SG7 212 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 CIARTQ8N365 385 aaPredicted RBP4.96□□□□□ -1.62
CMTM1-220ENST00000534143 CCDC71LQ8N9Z2 235 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.96□□□□□ -1.62
CMTM1-220ENST00000534143 MAPK1IP1LQ8NDC0 245 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 BEND2Q8NDZ0 799 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 OR52B4Q8NGK2 314 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 OR13D1Q8NGV5 346 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 RTN4IP1Q8WWV3 396 aaPredicted RBP4.96□□□□□ -1.62
CMTM1-220ENST00000534143 RAB24Q969Q5 203 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 TMEM186Q96B77 213 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 MSI2Q96DH6 328 aaKnown RBP4.96□□□□□ -1.62
CMTM1-220ENST00000534143 GALNT14Q96FL9 552 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 NOL4LQ96MY1 436 aaPredicted RBP4.96□□□□□ -1.62
CMTM1-220ENST00000534143 GPHA2Q96T91 129 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 GGACTQ9BVM4 153 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 CLEC7AQ9BXN2 247 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 OR2D2Q9H210 308 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 ZMAT4Q9H898 229 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 SLC2A9Q9NRM0 540 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 ZNRD1Q9P1U0 126 aa4.96□□□□□ -1.62
CMTM1-220ENST00000534143 RBM7Q9Y580 266 aaKnown RBP4.96□□□□□ -1.62
CMTM1-220ENST00000534143 ANK3Q12955 4377 aaKnown RBP4.96□□□□□ -1.62
CMTM1-220ENST00000534143 WNK2Q9Y3S1 2297 aa4.95□□□□□ -1.62
CMTM1-220ENST00000534143 SAA2-SAA4A0A096LPE2 208 aa4.95□□□□□ -1.62
CMTM1-220ENST00000534143 A0A0B4J2A0 478 aa4.95□□□□□ -1.62
CMTM1-220ENST00000534143 TEX13DA0A0J9YY54 714 aaPredicted RBP4.95□□□□□ -1.62
CMTM1-220ENST00000534143 A0A1W2PRX2 142 aa4.95□□□□□ -1.62
CMTM1-220ENST00000534143 RNF222A6NCQ9 220 aa4.95□□□□□ -1.62
CMTM1-220ENST00000534143 BTBD17A6NE02 478 aa4.95□□□□□ -1.62
CMTM1-220ENST00000534143 COLCA2A8K830 154 aa4.95□□□□□ -1.62
CMTM1-220ENST00000534143 BUB1B-PAK6H3BSN5 160 aa4.95□□□□□ -1.62
CMTM1-220ENST00000534143 PPP1R2P9O14990 202 aa4.95□□□□□ -1.62
CMTM1-220ENST00000534143 NDUFS6O75380 124 aaKnown RBP4.95□□□□□ -1.62
CMTM1-220ENST00000534143 SFT2D2O95562 160 aa4.95□□□□□ -1.62
CMTM1-220ENST00000534143 HLA-AP01891 365 aaKnown RBP4.95□□□□□ -1.62
CMTM1-220ENST00000534143 MBP02144 154 aa4.95□□□□□ -1.62
CMTM1-220ENST00000534143 SAA2P0DJI9 122 aaPredicted RBP4.95□□□□□ -1.62
CMTM1-220ENST00000534143 NQO2P16083 231 aa4.95□□□□□ -1.62
CMTM1-220ENST00000534143 AKR1C4P17516 323 aa4.95□□□□□ -1.62
CMTM1-220ENST00000534143 COX7A1P24310 79 aa4.95□□□□□ -1.62
CMTM1-220ENST00000534143 F2RP25116 425 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms