RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 OR4C12Q96R67 309 aa7.29□□□□□ -1.24
SSBP3-215ENST00000533946 ABHD1Q96SE0 405 aa7.29□□□□□ -1.24
SSBP3-215ENST00000533946 RETNQ9HD89 108 aa7.29□□□□□ -1.24
SSBP3-215ENST00000533946 IFT46Q9NQC8 304 aa7.29□□□□□ -1.24
SSBP3-215ENST00000533946 SLC2A9Q9NRM0 540 aa7.29□□□□□ -1.24
SSBP3-215ENST00000533946 TMEM140Q9NV12 185 aa7.29□□□□□ -1.24
SSBP3-215ENST00000533946 KLK11Q9UBX7 282 aa7.29□□□□□ -1.24
SSBP3-215ENST00000533946 PRELID3BQ9Y3B1 194 aa7.29□□□□□ -1.24
SSBP3-215ENST00000533946 IGLV11-55A0A075B6I3 123 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 IGHV3OR16-8A0A075B7F1 116 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 ZNF785A8K8V0 405 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 CTDSP2O14595 271 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 GABARAPO95166 117 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 CRYGCP07315 174 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 IGHV4-30-4P0DP06 118 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 PSMB6P28072 239 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 PRSS3P35030 304 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 ALDH3B2P48448 385 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 RPL8P62917 257 aaKnown RBP7.28□□□□□ -1.24
SSBP3-215ENST00000533946 CBX3Q13185 183 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 CD300EQ496F6 205 aaPredicted RBP7.28□□□□□ -1.24
SSBP3-215ENST00000533946 FAAP20Q6NZ36 180 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 ANKRD13BQ86YJ7 626 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 SPIN2AQ99865 258 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 SPIN2BQ9BPZ2 258 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 HRASLSQ9HDD0 168 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 SMAD5-AS1Q9Y6J3 95 aa7.28□□□□□ -1.24
SSBP3-215ENST00000533946 A0A0G2JLM5 398 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 NPIPB5A8MRT5 1133 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 F8W735 103 aaPredicted RBP7.27□□□□□ -1.25
SSBP3-215ENST00000533946 KRASP01116 189 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 IGHV3-48P01763 117 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 APOA1P02647 267 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 CD7P09564 240 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 CD40LGP29965 261 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 RANBP1P43487 201 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 INSL3P51460 131 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 HERV-K104P61576 105 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 POU2AF1Q16633 256 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 RPEL1Q2QD12 228 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 TM4SF20Q53R12 229 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 SPINK9Q5DT21 86 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 OR5H2Q8NGV7 314 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 USMG5Q96IX5 58 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 WWC2-AS2Q96NR7 200 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 C19orf73Q9NVV2 129 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 BET1LQ9NYM9 111 aa7.27□□□□□ -1.25
SSBP3-215ENST00000533946 TMEM213A2RRL7 107 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 SLC22A5O76082 557 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 ACTL6BO94805 426 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 HPRT1P00492 218 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 HRASP01112 189 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 ZP3P21754 424 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 CBX5P45973 191 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 KLK9Q2XQG4 91 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 DEFB114Q30KQ6 69 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 TBC1D26Q86UD7 250 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 LAX1Q8IWV1 398 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 NECAP1Q8NC96 275 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 DMBX1Q8NFW5 382 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 OR6Q1Q8NGQ2 317 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 DGCR14Q96DF8 476 aaKnown RBP7.26□□□□□ -1.25
SSBP3-215ENST00000533946 WDR89Q96FK6 387 aaPredicted RBP7.26□□□□□ -1.25
SSBP3-215ENST00000533946 TMEM68Q96MH6 324 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 RCHY1Q96PM5 261 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 HINT2Q9BX68 163 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 PLEKHA3Q9HB20 300 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 MLXQ9UH92 298 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 KLK9Q9UKQ9 250 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 ZNF257Q9Y2Q1 563 aa7.26□□□□□ -1.25
SSBP3-215ENST00000533946 A0A0G2JRQ6 117 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 RBMY1BA6NDE4 496 aaKnown RBP7.25□□□□□ -1.25
SSBP3-215ENST00000533946 RBMY1EA6NEQ0 496 aaKnown RBP7.25□□□□□ -1.25
SSBP3-215ENST00000533946 C2orf70A6NJV1 201 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 FAM223BA6NKX1 122 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 FAM25AB3EWG3 89 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 FAM25CB3EWG5 89 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 FAM25GB3EWG6 89 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 RBFOX2O43251 390 aaKnown RBP eCLIP7.25□□□□□ -1.253e-6■□□□□ 10.7
SSBP3-215ENST00000533946 CD3DP04234 171 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 CLEC3BP05452 202 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 RBMY1DP0C7P1 496 aaKnown RBP7.25□□□□□ -1.25
SSBP3-215ENST00000533946 OR13C7P0DN81 318 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 FOLR2P14207 255 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 NQO2P16083 231 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 F2RP25116 425 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 GPR183P32249 361 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 TAS2R31P59538 309 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 MSMO1Q15800 293 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 SP6Q3SY56 376 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 CROCCP3Q8IVE0 287 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 FAM223AQ8IWN6 122 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 DEFB125Q8N687 156 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 ZBTB34Q8NCN2 500 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 ZNF502Q8TBZ5 544 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 SEC22AQ96IW7 307 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 FAM110AQ9BQ89 295 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 CHRDL1Q9BU40 450 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 ELOVL1Q9BW60 279 aa7.25□□□□□ -1.25
SSBP3-215ENST00000533946 PLEKHA2Q9HB19 425 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 228.1 ms