RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 FAM110DQ8TAY7 271 aaPredicted RBP9.34□□□□□ -0.91
SSBP3-214ENST00000533209 CASTOR1Q8WTX7 329 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 TMEM230Q96A57 120 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 SCGB3A2Q96PL1 93 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 OR4F4Q96R69 305 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 PHB2Q99623 299 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 SPIN2AQ99865 258 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 SPIN2BQ9BPZ2 258 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 NBEAL1Q6ZS30 2694 aa9.34□□□□□ -0.91
SSBP3-214ENST00000533209 FBN3Q75N90 2809 aa9.33□□□□□ -0.92
SSBP3-214ENST00000533209 TEX13DA0A0J9YY54 714 aaPredicted RBP9.33□□□□□ -0.92
SSBP3-214ENST00000533209 HMX3A6NHT5 357 aa9.33□□□□□ -0.92
SSBP3-214ENST00000533209 CGB1A6NKQ9 187 aa9.33□□□□□ -0.92
SSBP3-214ENST00000533209 B3GALNT1O75752 331 aa9.33□□□□□ -0.92
SSBP3-214ENST00000533209 OR9G9P0C7N8 305 aa9.33□□□□□ -0.92
SSBP3-214ENST00000533209 UCP1P25874 307 aa9.33□□□□□ -0.92
SSBP3-214ENST00000533209 OR2B8PP59922 312 aa9.33□□□□□ -0.92
SSBP3-214ENST00000533209 ZNF695Q8IW36 515 aa9.33□□□□□ -0.92
SSBP3-214ENST00000533209 ZNF491Q8N8L2 437 aa9.33□□□□□ -0.92
SSBP3-214ENST00000533209 KLHL30-AS1Q8NEE0 82 aa9.33□□□□□ -0.92
SSBP3-214ENST00000533209 GLYATL2Q8WU03 294 aa9.33□□□□□ -0.92
SSBP3-214ENST00000533209 S100ZQ8WXG8 99 aa9.33□□□□□ -0.92
SSBP3-214ENST00000533209 TMEM222Q9H0R3 208 aa9.33□□□□□ -0.92
SSBP3-214ENST00000533209 NAA60Q9H7X0 242 aa9.33□□□□□ -0.92
SSBP3-214ENST00000533209 LINC00854A0A1B0GVQ3 168 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 NAP1L6A6NFF2 107 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 NUDT19A8MXV4 375 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 H3BUA1 57 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 IGKV1-5P01602 117 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 OR5AC1P0C628 307 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 P0C879 139 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 SLC6A1P30531 599 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 BTCP35070 178 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 CCR6P51684 374 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 ETV3LQ6ZN32 361 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 C8orf86Q6ZUL3 223 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 TTC9CQ8N5M4 171 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 UBE2E2Q96LR5 201 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 MS4A10Q96PG2 267 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 FYTTD1Q96QD9 318 aaKnown RBP9.32□□□□□ -0.92
SSBP3-214ENST00000533209 SLC25A21Q9BQT8 299 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-214ENST00000533209 CCDC32Q9BV29 185 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 GNB4Q9HAV0 340 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 NSG2Q9Y328 171 aa9.32□□□□□ -0.92
SSBP3-214ENST00000533209 TEX50A0A1B0GTY4 177 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 DBX1A6NMT0 343 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 I3L521 148 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 PLA2G10O15496 165 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 SNAPC5O75971 98 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 BRI3O95415 125 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 CDS2O95674 445 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 TRGV3P03979 118 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 AREGP15514 252 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 AKR1C4P17516 323 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 CD40LGP29965 261 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 SUPT4H1P63272 117 aaKnown RBP9.31□□□□□ -0.92
SSBP3-214ENST00000533209 DHODHQ02127 395 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 TMEM187Q14656 261 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 TRIM16LQ309B1 348 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 H2BFWTQ7Z2G1 175 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 SGPP2Q8IWX5 399 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 LHFPL5Q8TAF8 219 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 C4orf3Q8WVX3 66 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 GALNT14Q96FL9 552 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 TSC22D3Q99576 134 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 C7orf50Q9BRJ6 194 aaKnown RBP9.31□□□□□ -0.92
SSBP3-214ENST00000533209 COMMD5Q9GZQ3 224 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 SLA2Q9H6Q3 261 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 ZNF355PQ9NSJ1 428 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 TMEM14BQ9NUH8 114 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 COA4Q9NYJ1 87 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 PRNDQ9UKY0 176 aa9.31□□□□□ -0.92
SSBP3-214ENST00000533209 A0A0G2JRQ6 117 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 IGLC7A0M8Q6 106 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 C15orf61A6NNL5 157 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 NPIPB5A8MRT5 1133 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 RBMXL2O75526 392 aaKnown RBP9.3□□□□□ -0.92
SSBP3-214ENST00000533209 NDUFB6O95139 128 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 TPPP2P59282 170 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 RUNX1Q01196 453 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 RBMS2Q15434 407 aaKnown RBP9.3□□□□□ -0.92
SSBP3-214ENST00000533209 IZUMO4Q1ZYL8 232 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 DEFB136Q30KP8 78 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 TMED4Q7Z7H5 227 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 OR1L8Q8NGR8 309 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 RAX2Q96IS3 184 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 DUX3Q96PT4 197 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 OR5B12Q96R08 314 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 QTRT1Q9BXR0 403 aaKnown RBP9.3□□□□□ -0.92
SSBP3-214ENST00000533209 KCNIP3Q9Y2W7 256 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 OR51B2Q9Y5P1 312 aa9.3□□□□□ -0.92
SSBP3-214ENST00000533209 TRBV9A0A0B4J1U6 114 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 CENPXA8MT69 81 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 ATG12O94817 140 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 PF4P02776 101 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 PRH1P02810 166 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 CRYGCP07315 174 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 TRAPPC2P0DI81 140 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 TRAPPC2BP0DI82 140 aa9.29□□□□□ -0.92
SSBP3-214ENST00000533209 CTRB1P17538 263 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms