RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, human

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF3A-215	ENST00000533145	INAFM1	C9JVW0	142 aa		11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	FCN1	O00602	326 aa		11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	ST8SIA3	O43173	380 aa		11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	HOXA3	O43365	443 aa	Predicted RBP	11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	CRLF1	O75462	422 aa		11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	CCNK	O75909	580 aa		11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	HLA-DRB1	P01911	266 aa		11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	AMY1A	P04745	511 aa		11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	NKX2-1	P43699	371 aa	Predicted RBP	11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	HSPE1	P61604	102 aa	Known RBP	11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	CD83	Q01151	205 aa		11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	LY6E	Q16553	131 aa		11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	ZNF562	Q6V9R5	426 aa		11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	RBMS3	Q6XE24	437 aa	Known RBP	11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145		Q71RC1	249 aa	Predicted RBP	11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	OR5B3	Q8NH48	314 aa		11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	WDR89	Q96FK6	387 aa	Predicted RBP	11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	RASL11B	Q9BPW5	248 aa		11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	QTRT1	Q9BXR0	403 aa	Known RBP	11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	TPSG1	Q9NRR2	321 aa		11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	GSKIP	Q9P0R6	139 aa		11.2	□□□□□ -0.62
HIF3A-215	ENST00000533145	TEX50	A0A1B0GTY4	177 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	CLDN34	H7C241	214 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	MBP	P02686	304 aa	Predicted RBP	11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	FAM157C	P0CG43	387 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	SPCS3	P61009	180 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	SSBP2	P81877	361 aa	Predicted RBP	11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	TNFRSF9	Q07011	255 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	PJVK	Q0ZLH3	352 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	PLGLA	Q15195	96 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	CXorf66	Q5JRM2	361 aa	Predicted RBP	11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	AKAP14	Q86UN6	197 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	TMEM219	Q86XT9	240 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	TCTE3	Q8IZS6	198 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	OR1L8	Q8NGR8	309 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	PPP1R1C	Q8WVI7	109 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	CHIA	Q9BZP6	476 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	RANGRF	Q9HD47	186 aa	Predicted RBP	11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	NDUFA4L2	Q9NRX3	87 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	OR51B2	Q9Y5P1	312 aa		11.19	□□□□□ -0.62
HIF3A-215	ENST00000533145	INS-IGF2	F8WCM5	200 aa		11.18	□□□□□ -0.62
HIF3A-215	ENST00000533145	RBMXL2	O75526	392 aa	Known RBP	11.18	□□□□□ -0.62
HIF3A-215	ENST00000533145	MED6	O75586	246 aa		11.18	□□□□□ -0.62
HIF3A-215	ENST00000533145	LY86	O95711	162 aa		11.18	□□□□□ -0.62
HIF3A-215	ENST00000533145	PSMB6	P28072	239 aa		11.18	□□□□□ -0.62
HIF3A-215	ENST00000533145	COMP	P49747	757 aa	Predicted RBP	11.18	□□□□□ -0.62
HIF3A-215	ENST00000533145	OR2B8P	P59922	312 aa		11.18	□□□□□ -0.62
HIF3A-215	ENST00000533145	FGL1	Q08830	312 aa		11.18	□□□□□ -0.62
HIF3A-215	ENST00000533145	RAB32	Q13637	225 aa		11.18	□□□□□ -0.62
HIF3A-215	ENST00000533145	ZNF418	Q8TF45	676 aa	Predicted RBP	11.18	□□□□□ -0.62
HIF3A-215	ENST00000533145	COMMD5	Q9GZQ3	224 aa		11.18	□□□□□ -0.62
HIF3A-215	ENST00000533145	MXRA5	Q9NR99	2828 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	IGHV7-81	A0A0B4J1V7	117 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	CGB1	A6NKQ9	187 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145		K7EPK0	472 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	SYNGR2	O43760	224 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	CHST1	O43916	411 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	ACTL6B	O94805	426 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	MPC2	O95563	127 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	CA2	P00918	260 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	IFNA17	P01571	189 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	LYL1	P12980	280 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	RPL27A	P46776	148 aa	Known RBP	11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	CX3CL1	P78423	397 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	PRCD	Q00LT1	54 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	CLCC1	Q96S66	551 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	SRSF8	Q9BRL6	282 aa	Known RBP	11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145	C11orf1	Q9H5F2	150 aa		11.17	□□□□□ -0.62
HIF3A-215	ENST00000533145		E7EUB6	86 aa		11.16	□□□□□ -0.62
HIF3A-215	ENST00000533145		G3V3Q6	166 aa		11.16	□□□□□ -0.62
HIF3A-215	ENST00000533145	RLN2	P04090	185 aa		11.16	□□□□□ -0.62
HIF3A-215	ENST00000533145	HILS1	P60008	231 aa		11.16	□□□□□ -0.62
HIF3A-215	ENST00000533145	RPL15	P61313	204 aa	Known RBP	11.16	□□□□□ -0.62
HIF3A-215	ENST00000533145	TNXA	Q16473	311 aa		11.16	□□□□□ -0.62
HIF3A-215	ENST00000533145	OR2T35	Q8NGX2	323 aa		11.16	□□□□□ -0.62
HIF3A-215	ENST00000533145	JMJD8	Q96S16	334 aa		11.16	□□□□□ -0.62
HIF3A-215	ENST00000533145	RAB40C	Q96S21	281 aa		11.16	□□□□□ -0.62
HIF3A-215	ENST00000533145	RNF126	Q9BV68	326 aa		11.16	□□□□□ -0.62
HIF3A-215	ENST00000533145	RBKS	Q9H477	322 aa		11.16	□□□□□ -0.62
HIF3A-215	ENST00000533145	ESM1	Q9NQ30	184 aa		11.16	□□□□□ -0.62
HIF3A-215	ENST00000533145	RCL1	Q9Y2P8	373 aa	Known RBP	11.16	□□□□□ -0.62
HIF3A-215	ENST00000533145	TRAV14DV4	A0A0A6YYC5	116 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145		A0A1B0GW64	132 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145		A0A1W2PN81	502 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	DNAJC9-AS1	A6NH13	148 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145		H0YIZ8	118 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	PFDN1	O60925	122 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	DEDD	O75618	318 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	IGHG2	P01859	326 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	PET100	P0DJ07	73 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	SLC25A4	P12235	298 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	MYOD1	P15172	320 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	CHRNA7	P36544	502 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	VDAC2	P45880	294 aa	Predicted RBP	11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	CRIP2	P52943	208 aa	Predicted RBP	11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	TAS2R30	P59541	319 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	POLR2G	P62487	172 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	FXYD3	Q14802	87 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145		Q5BKY6	102 aa		11.15	□□□□□ -0.62
HIF3A-215	ENST00000533145	C11orf87	Q6NUJ2	197 aa		11.15	□□□□□ -0.62

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