RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 IGLV2-23P01705 113 aa12.96□□□□□ -0.33
PKP3-209ENST00000533069 EGR2P11161 476 aaPredicted RBP12.96□□□□□ -0.33
PKP3-209ENST00000533069 SRPXP78539 464 aa12.96□□□□□ -0.33
PKP3-209ENST00000533069 KIAA0141Q14154 515 aaPredicted RBP12.96□□□□□ -0.33
PKP3-209ENST00000533069 ZNF818PQ6ZRF7 136 aa12.96□□□□□ -0.33
PKP3-209ENST00000533069 DDB2Q92466 427 aa12.96□□□□□ -0.33
PKP3-209ENST00000533069 GALNT14Q96FL9 552 aa12.96□□□□□ -0.33
PKP3-209ENST00000533069 RTBDNQ9BSG5 229 aaPredicted RBP12.96□□□□□ -0.33
PKP3-209ENST00000533069 CCL28Q9NRJ3 127 aa12.96□□□□□ -0.33
PKP3-209ENST00000533069 TEX13DA0A0J9YY54 714 aaPredicted RBP12.95□□□□□ -0.34
PKP3-209ENST00000533069 CRYM-AS1A6NIL9 109 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 I3L521 148 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 SOX15O60248 233 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 CREBL2O60519 120 aaPredicted RBP12.95□□□□□ -0.34
PKP3-209ENST00000533069 OR4E1P0C645 316 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 OR8U8P0C7N1 319 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 SPNP16150 400 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 FXYD3Q14802 87 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 TATDN3Q17R31 274 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 C4orf46Q504U0 113 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 UNQ5815/PRO19632Q6UWF5 114 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 OR11H1Q8NG94 326 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 OSR1Q8TAX0 266 aaPredicted RBP12.95□□□□□ -0.34
PKP3-209ENST00000533069 CD300LFQ8TDQ1 290 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 GNB4Q9HAV0 340 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 TPSG1Q9NRR2 321 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 FLVCR2Q9UPI3 526 aa12.95□□□□□ -0.34
PKP3-209ENST00000533069 C7orf66A4D0T2 115 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 LINC00473A8K010 186 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 MPPED1O15442 326 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 CNIH1O95406 144 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 CRYGBP07316 175 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 AKR1C4P17516 323 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 KIR2DS2P43631 304 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 VMA21Q3ZAQ7 101 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 LYG2Q86SG7 212 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 LFNGQ8NES3 379 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 GRPEL2Q8TAA5 225 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 TMEM68Q96MH6 324 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 FAM103A1Q9BTL3 118 aaKnown RBP12.94□□□□□ -0.34
PKP3-209ENST00000533069 SLA2Q9H6Q3 261 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 NAA60Q9H7X0 242 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 PRELID3BQ9Y3B1 194 aa12.94□□□□□ -0.34
PKP3-209ENST00000533069 A0A0B4J2A0 478 aa12.93□□□□□ -0.34
PKP3-209ENST00000533069 H0Y980 276 aa12.93□□□□□ -0.34
PKP3-209ENST00000533069 PGLYRP1O75594 196 aaPredicted RBP12.93□□□□□ -0.34
PKP3-209ENST00000533069 SFT2D2O95562 160 aa12.93□□□□□ -0.34
PKP3-209ENST00000533069 CRYZL1O95825 349 aa12.93□□□□□ -0.34
PKP3-209ENST00000533069 IGLV2-14P01704 120 aa12.93□□□□□ -0.34
PKP3-209ENST00000533069 HLA-AP01891 365 aaKnown RBP12.93□□□□□ -0.34
PKP3-209ENST00000533069 RPA2P15927 270 aa12.93□□□□□ -0.34
PKP3-209ENST00000533069 ANXA7P20073 488 aaKnown RBP12.93□□□□□ -0.34
PKP3-209ENST00000533069 F2RP25116 425 aa12.93□□□□□ -0.34
PKP3-209ENST00000533069 HOXD3P31249 432 aaPredicted RBP12.93□□□□□ -0.34
PKP3-209ENST00000533069 UBE2KP61086 200 aa12.93□□□□□ -0.34
PKP3-209ENST00000533069 GNB1P62873 340 aa12.93□□□□□ -0.34
PKP3-209ENST00000533069 ZNF616Q08AN1 781 aa12.93□□□□□ -0.34
PKP3-209ENST00000533069 TEX45Q8NA69 505 aa12.93□□□□□ -0.34
PKP3-209ENST00000533069 OR1N2Q8NGR9 330 aa12.93□□□□□ -0.34
PKP3-209ENST00000533069 COQ8AQ8NI60 647 aa12.93□□□□□ -0.34
PKP3-209ENST00000533069 ZNF431Q8TF32 576 aaPredicted RBP12.93□□□□□ -0.34
PKP3-209ENST00000533069 SHPKQ9UHJ6 478 aa12.93□□□□□ -0.34
PKP3-209ENST00000533069 C3orf85A0A1B0GTC6 90 aa12.92□□□□□ -0.34
PKP3-209ENST00000533069 H3BUA1 57 aa12.92□□□□□ -0.34
PKP3-209ENST00000533069 RBFOX2O43251 390 aaKnown RBP eCLIP12.92□□□□□ -0.34
PKP3-209ENST00000533069 ATG12O94817 140 aa12.92□□□□□ -0.34
PKP3-209ENST00000533069 LGALS1P09382 135 aaKnown RBP12.92□□□□□ -0.34
PKP3-209ENST00000533069 VAMP1P23763 118 aa12.92□□□□□ -0.34
PKP3-209ENST00000533069 KRTAP10-11P60412 298 aa12.92□□□□□ -0.34
PKP3-209ENST00000533069 DHRS2Q13268 280 aa12.92□□□□□ -0.34
PKP3-209ENST00000533069 PHLDA2Q53GA4 152 aa12.92□□□□□ -0.34
PKP3-209ENST00000533069 C9orf66Q5T8R8 295 aa12.92□□□□□ -0.34
PKP3-209ENST00000533069 TBC1D26Q86UD7 250 aa12.92□□□□□ -0.34
PKP3-209ENST00000533069 TMEM230Q96A57 120 aa12.92□□□□□ -0.34
PKP3-209ENST00000533069 PHB2Q99623 299 aa12.92□□□□□ -0.34
PKP3-209ENST00000533069 C9orf170A2RU37 121 aa12.91□□□□□ -0.34
PKP3-209ENST00000533069 SRRM4A7MD48 611 aaKnown RBP12.91□□□□□ -0.34
PKP3-209ENST00000533069 FCGR3BO75015 233 aa12.91□□□□□ -0.34
PKP3-209ENST00000533069 PI3P19957 117 aa12.91□□□□□ -0.34
PKP3-209ENST00000533069 SSBP2P81877 361 aaPredicted RBP12.91□□□□□ -0.34
PKP3-209ENST00000533069 PJVKQ0ZLH3 352 aa12.91□□□□□ -0.34
PKP3-209ENST00000533069 PPP1R1AQ13522 171 aa12.91□□□□□ -0.34
PKP3-209ENST00000533069 EIF4EBP1Q13541 118 aaPredicted RBP12.91□□□□□ -0.34
PKP3-209ENST00000533069 ADAD2Q8NCV1 583 aaKnown RBP12.91□□□□□ -0.34
PKP3-209ENST00000533069 MITD1Q8WV92 249 aa12.91□□□□□ -0.34
PKP3-209ENST00000533069 IL22RA2Q969J5 263 aa12.91□□□□□ -0.34
PKP3-209ENST00000533069 OR5B12Q96R08 314 aa12.91□□□□□ -0.34
PKP3-209ENST00000533069 AIFM2Q9BRQ8 373 aa12.91□□□□□ -0.34
PKP3-209ENST00000533069 DUXBA0A1W2PPF3 345 aa12.9□□□□□ -0.34
PKP3-209ENST00000533069 SEC14L6B5MCN3 397 aa12.9□□□□□ -0.34
PKP3-209ENST00000533069 K7EIL1 84 aa12.9□□□□□ -0.34
PKP3-209ENST00000533069 RAMP3O60896 148 aa12.9□□□□□ -0.34
PKP3-209ENST00000533069 SERPINE2P07093 398 aa12.9□□□□□ -0.34
PKP3-209ENST00000533069 TPPP2P59282 170 aa12.9□□□□□ -0.34
PKP3-209ENST00000533069 PRSS8Q16651 343 aa12.9□□□□□ -0.34
PKP3-209ENST00000533069 LGI3Q8N145 548 aa12.9□□□□□ -0.34
PKP3-209ENST00000533069 LRTM2Q8N967 370 aa12.9□□□□□ -0.34
PKP3-209ENST00000533069 OR4S2Q8NH73 311 aa12.9□□□□□ -0.34
PKP3-209ENST00000533069 CASTOR1Q8WTX7 329 aa12.9□□□□□ -0.34
PKP3-209ENST00000533069 TCTEX1D2Q8WW35 142 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms