RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 TMSB15BA0A087X1C1 80 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 B4DSR2 109 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 TGFBR3LH3BV60 316 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 OR1P1Q8NH06 330 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 REPIN1Q9BWE0 567 aaKnown RBP9.08□□□□□ -0.96
COLCA1-203ENST00000532918 PLSCR4Q9NRQ2 329 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 CD74P04233 296 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 IL4P05112 153 aa9.08□□□□□ -0.96
COLCA1-203ENST00000532918 A0A1W2PP11 408 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 TCRBV4S1A1TA0A5B7 111 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 K7ENP7 123 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 RAMP1O60894 148 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 GCM2O75603 506 aaPredicted RBP9.07□□□□□ -0.96
COLCA1-203ENST00000532918 SSTR5P35346 364 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 LINC01590Q5TEZ4 76 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 H1FOOQ8IZA3 346 aaPredicted RBP9.07□□□□□ -0.96
COLCA1-203ENST00000532918 DERL1Q9BUN8 251 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 SMDT1Q9H4I9 107 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 DEPPQ9NTK1 212 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 CX3CL1P78423 397 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 OR10S1Q8NGN2 331 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 ANAPC13Q9BS18 74 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 MRPS16Q9Y3D3 137 aaKnown RBP9.07□□□□□ -0.96
COLCA1-203ENST00000532918 SIRT4Q9Y6E7 314 aaPredicted RBP9.07□□□□□ -0.96
COLCA1-203ENST00000532918 A0A1B0GWB2 263 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 CA7P43166 264 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 UNC119Q13432 240 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 SELENOHQ8IZQ5 122 aaKnown RBP9.07□□□□□ -0.96
COLCA1-203ENST00000532918 SFRP2Q96HF1 295 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 MIXL1Q9H2W2 232 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 GPR132Q9UNW8 380 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 CLDN16Q9Y5I7 305 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 V9GYH0 126 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 SMIM13P0DJ93 91 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 CD300CQ08708 224 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 FAM159AQ6UWV7 190 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 COPS9Q8WXC6 57 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 GPR146Q96CH1 333 aa9.07□□□□□ -0.96
COLCA1-203ENST00000532918 PGPA6NDG6 321 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 PRSS47A8MTI9 375 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 RNASE1P07998 156 aaKnown RBP9.06□□□□□ -0.96
COLCA1-203ENST00000532918 C8orf88P0DMB2 117 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 TNFRSF9Q07011 255 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 Q6ZS92 163 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 A0A1W2PRX2 142 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 CRYBA2P53672 197 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 CEP290O15078 2479 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 EIF3GO75821 320 aaKnown RBP eCLIP9.06□□□□□ -0.96
COLCA1-203ENST00000532918 TRGC1P0CF51 173 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 NBL1P41271 181 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 ASCL4Q6XD76 172 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 FLVCR1-AS1Q8TAF5 88 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 FBXL15Q9H469 300 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 TDRD6O60522 2096 aaKnown RBP9.06□□□□□ -0.96
COLCA1-203ENST00000532918 CGB1A6NKQ9 187 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 TRGC2P03986 189 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 ATP6V0CP27449 155 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 CDX1P47902 265 aaPredicted RBP9.06□□□□□ -0.96
COLCA1-203ENST00000532918 DRAM1Q8N682 238 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 ITLN2Q8WWU7 325 aaPredicted RBP9.06□□□□□ -0.96
COLCA1-203ENST00000532918 ALKBH7Q9BT30 221 aaPredicted RBP9.06□□□□□ -0.96
COLCA1-203ENST00000532918 C21orf62Q9NYP8 219 aa9.06□□□□□ -0.96
COLCA1-203ENST00000532918 KLF4O43474 513 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 HIST1H1AQ02539 215 aaPredicted RBP9.05□□□□□ -0.96
COLCA1-203ENST00000532918 TNFRSF14Q92956 283 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 IGHV1-18A0A0C4DH31 117 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 TMEM14DPA8MWL7 114 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 NBR2O15453 112 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 REG1AP05451 166 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 WNT2P09544 360 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 ANOS1P23352 680 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 ZNF345Q14585 488 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 SGMS2Q8NHU3 365 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 PSME4Q14997 1843 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 PCM1Q15154 2024 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 SEC16AO15027 2179 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 DNAL4O96015 105 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 TMEM177Q53S58 311 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 SP5Q6BEB4 398 aaPredicted RBP9.05□□□□□ -0.96
COLCA1-203ENST00000532918 GTSCR1Q86UQ5 136 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 TMEM252Q8N6L7 170 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 IL36RNQ9UBH0 155 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 TUBGCP6Q96RT7 1819 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 RALGAPA2Q2PPJ7 1873 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 IGKV3D-15A0A087WSY6 115 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 C12orf77C9JDV5 145 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 LEPROTL1O95214 131 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 HKR1P10072 659 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 FOLR2P14207 255 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 TMEM133Q9H2Q1 129 aa9.05□□□□□ -0.96
COLCA1-203ENST00000532918 H7C1H1 209 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 RBFOX2O43251 390 aaKnown RBP eCLIP9.04□□□□□ -0.96
COLCA1-203ENST00000532918 IGKV3-15P01624 115 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 HLA-DRB1P01911 266 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 SMIM8Q96KF7 97 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 RTN4RQ9BZR6 473 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 ZDBF2Q9HCK1 2354 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 A0A1B0GW15 77 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 C1QTNF9BB2RNN3 333 aa9.04□□□□□ -0.96
COLCA1-203ENST00000532918 C1QCP02747 245 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms