RNA–Protein interactions for RNA: ENST00000532751.1

PTPRK-222, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 4

Gene PTPRK, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-222ENST00000532751 RPA2P15927 270 aa17.03■□□□□ 0.32
PTPRK-222ENST00000532751 PIGPP57054 158 aa17.03■□□□□ 0.32
PTPRK-222ENST00000532751 ZNF616Q08AN1 781 aa17.03■□□□□ 0.32
PTPRK-222ENST00000532751 FHL3Q13643 280 aa17.03■□□□□ 0.32
PTPRK-222ENST00000532751 SPANXN2Q5MJ10 180 aa17.03■□□□□ 0.32
PTPRK-222ENST00000532751 TTC9CQ8N5M4 171 aa17.03■□□□□ 0.32
PTPRK-222ENST00000532751 ADAD2Q8NCV1 583 aaKnown RBP17.03■□□□□ 0.32
PTPRK-222ENST00000532751 PRRT1Q99946 306 aa17.03■□□□□ 0.32
PTPRK-222ENST00000532751 COMMD5Q9GZQ3 224 aa17.03■□□□□ 0.32
PTPRK-222ENST00000532751 V9GYH0 126 aa17.03■□□□□ 0.32
PTPRK-222ENST00000532751 KRASP01116 189 aa17.02■□□□□ 0.32
PTPRK-222ENST00000532751 CTSDP07339 412 aaPredicted RBP17.02■□□□□ 0.32
PTPRK-222ENST00000532751 IL6RP08887 468 aaPredicted RBP17.02■□□□□ 0.32
PTPRK-222ENST00000532751 PI3P19957 117 aa17.02■□□□□ 0.32
PTPRK-222ENST00000532751 BEAN1Q3B7T3 259 aa17.02■□□□□ 0.32
PTPRK-222ENST00000532751 CCDC190Q86UF4 302 aa17.02■□□□□ 0.32
PTPRK-222ENST00000532751 Q8N402 240 aa17.02■□□□□ 0.32
PTPRK-222ENST00000532751 OR13C8Q8NGS7 320 aa17.02■□□□□ 0.32
PTPRK-222ENST00000532751 MARCH1Q8TCQ1 289 aa17.02■□□□□ 0.32
PTPRK-222ENST00000532751 SCP2D1Q9UJQ7 156 aa17.02■□□□□ 0.32
PTPRK-222ENST00000532751 C14orf166Q9Y224 244 aaKnown RBP17.02■□□□□ 0.32
PTPRK-222ENST00000532751 HMX3A6NHT5 357 aa17.01■□□□□ 0.31
PTPRK-222ENST00000532751 SERPINE2P07093 398 aa17.01■□□□□ 0.31
PTPRK-222ENST00000532751 FAUP35544 74 aaKnown RBP17.01■□□□□ 0.31
PTPRK-222ENST00000532751 G6PCP35575 357 aa17.01■□□□□ 0.31
PTPRK-222ENST00000532751 SURF2Q15527 256 aaPredicted RBP17.01■□□□□ 0.31
PTPRK-222ENST00000532751 CADM3Q8N126 398 aa17.01■□□□□ 0.31
PTPRK-222ENST00000532751 USMG5Q96IX5 58 aa17.01■□□□□ 0.31
PTPRK-222ENST00000532751 ZNF257Q9Y2Q1 563 aa17.01■□□□□ 0.31
PTPRK-222ENST00000532751 TRAV3A0A0B4J244 114 aa17■□□□□ 0.31
PTPRK-222ENST00000532751 TEX22C9J3V5 150 aa17■□□□□ 0.31
PTPRK-222ENST00000532751 LINC01619G3V211 115 aa17■□□□□ 0.31
PTPRK-222ENST00000532751 H0Y980 276 aa17■□□□□ 0.31
PTPRK-222ENST00000532751 SNAPC5O75971 98 aa17■□□□□ 0.31
PTPRK-222ENST00000532751 AP3S2P59780 193 aa17■□□□□ 0.31
PTPRK-222ENST00000532751 KPRPQ5T749 579 aaPredicted RBP17■□□□□ 0.31
PTPRK-222ENST00000532751 THOC7Q6I9Y2 204 aaKnown RBP17■□□□□ 0.31
PTPRK-222ENST00000532751 OR51S1Q8NGJ8 323 aa17■□□□□ 0.31
PTPRK-222ENST00000532751 OR6Q1Q8NGQ2 317 aa17■□□□□ 0.31
PTPRK-222ENST00000532751 TSC22D3Q99576 134 aa17■□□□□ 0.31
PTPRK-222ENST00000532751 ALX4Q9H161 411 aaPredicted RBP17■□□□□ 0.31
PTPRK-222ENST00000532751 NOTCH1P46531 2555 aa17■□□□□ 0.31
PTPRK-222ENST00000532751 C3orf85A0A1B0GTC6 90 aa16.99■□□□□ 0.31
PTPRK-222ENST00000532751 NPIPB5A8MRT5 1133 aa16.99■□□□□ 0.31
PTPRK-222ENST00000532751 E7EUB6 86 aa16.99■□□□□ 0.31
PTPRK-222ENST00000532751 DHFRP00374 187 aa16.99■□□□□ 0.31
PTPRK-222ENST00000532751 HSPB1P04792 205 aaKnown RBP16.99■□□□□ 0.31
PTPRK-222ENST00000532751 MYOD1P15172 320 aa16.99■□□□□ 0.31
PTPRK-222ENST00000532751 ETV6P41212 452 aa16.99■□□□□ 0.31
PTPRK-222ENST00000532751 ZNF79Q15937 498 aa16.99■□□□□ 0.31
PTPRK-222ENST00000532751 TOMM5Q8N4H5 51 aa16.99■□□□□ 0.31
PTPRK-222ENST00000532751 SCGB3A2Q96PL1 93 aa16.99■□□□□ 0.31
PTPRK-222ENST00000532751 MCUBQ9NWR8 336 aa16.99■□□□□ 0.31
PTPRK-222ENST00000532751 SLC2A8Q9NY64 477 aa16.99■□□□□ 0.31
PTPRK-222ENST00000532751 B3GALNT1O75752 331 aa16.98■□□□□ 0.31
PTPRK-222ENST00000532751 OR2B8PP59922 312 aa16.98■□□□□ 0.31
PTPRK-222ENST00000532751 PRNDQ9UKY0 176 aa16.98■□□□□ 0.31
PTPRK-222ENST00000532751 IGHV4OR15-8A0A075B7B6 117 aa16.97■□□□□ 0.31
PTPRK-222ENST00000532751 A0A087WW49 117 aa16.97■□□□□ 0.31
PTPRK-222ENST00000532751 FAM223BA6NKX1 122 aa16.97■□□□□ 0.31
PTPRK-222ENST00000532751 ATG12O94817 140 aa16.97■□□□□ 0.31
PTPRK-222ENST00000532751 PSMB6P28072 239 aa16.97■□□□□ 0.31
PTPRK-222ENST00000532751 FOXB2Q5VYV0 432 aa16.97■□□□□ 0.31
PTPRK-222ENST00000532751 H2BFWTQ7Z2G1 175 aa16.97■□□□□ 0.31
PTPRK-222ENST00000532751 FAM223AQ8IWN6 122 aa16.97■□□□□ 0.31
PTPRK-222ENST00000532751 OR1L8Q8NGR8 309 aa16.97■□□□□ 0.31
PTPRK-222ENST00000532751 TRIM63Q969Q1 353 aa16.97■□□□□ 0.31
PTPRK-222ENST00000532751 MRGPRFQ96AM1 343 aa16.97■□□□□ 0.31
PTPRK-222ENST00000532751 SEC22AQ96IW7 307 aa16.97■□□□□ 0.31
PTPRK-222ENST00000532751 SRSF8Q9BRL6 282 aaKnown RBP16.97■□□□□ 0.31
PTPRK-222ENST00000532751 QTRT1Q9BXR0 403 aaKnown RBP16.97■□□□□ 0.31
PTPRK-222ENST00000532751 RANGRFQ9HD47 186 aaPredicted RBP16.97■□□□□ 0.31
PTPRK-222ENST00000532751 FKBP11Q9NYL4 201 aa16.97■□□□□ 0.31
PTPRK-222ENST00000532751 GPR132Q9UNW8 380 aa16.97■□□□□ 0.31
PTPRK-222ENST00000532751 A0A1B0GW64 132 aa16.96■□□□□ 0.31
PTPRK-222ENST00000532751 PRH1P02810 166 aa16.96■□□□□ 0.31
PTPRK-222ENST00000532751 CRYGCP07315 174 aa16.96■□□□□ 0.31
PTPRK-222ENST00000532751 AREGP15514 252 aa16.96■□□□□ 0.31
PTPRK-222ENST00000532751 RHOGP84095 191 aa16.96■□□□□ 0.31
PTPRK-222ENST00000532751 DEDD2Q8WXF8 326 aa16.96■□□□□ 0.31
PTPRK-222ENST00000532751 TP53RKQ96S44 253 aa16.96■□□□□ 0.31
PTPRK-222ENST00000532751 RTBDNQ9BSG5 229 aaPredicted RBP16.96■□□□□ 0.31
PTPRK-222ENST00000532751 NSG2Q9Y328 171 aa16.96■□□□□ 0.31
PTPRK-222ENST00000532751 OR51B2Q9Y5P1 312 aa16.96■□□□□ 0.31
PTPRK-222ENST00000532751 TRBV9A0A0B4J1U6 114 aa16.95■□□□□ 0.3
PTPRK-222ENST00000532751 TEX13DA0A0J9YY54 714 aaPredicted RBP16.95■□□□□ 0.3
PTPRK-222ENST00000532751 TEX50A0A1B0GTY4 177 aa16.95■□□□□ 0.3
PTPRK-222ENST00000532751 IGKV1-39P01597 117 aa16.95■□□□□ 0.3
PTPRK-222ENST00000532751 IGKV1D-39P04432 117 aa16.95■□□□□ 0.3
PTPRK-222ENST00000532751 TRAPPC2P0DI81 140 aa16.95■□□□□ 0.3
PTPRK-222ENST00000532751 TRAPPC2BP0DI82 140 aa16.95■□□□□ 0.3
PTPRK-222ENST00000532751 DEFA4P12838 97 aa16.95■□□□□ 0.3
PTPRK-222ENST00000532751 HIST1H1BP16401 226 aaKnown RBP16.95■□□□□ 0.3
PTPRK-222ENST00000532751 CTRB1P17538 263 aa16.95■□□□□ 0.3
PTPRK-222ENST00000532751 DEFA5Q01523 94 aa16.95■□□□□ 0.3
PTPRK-222ENST00000532751 ZNF45Q02386 682 aa16.95■□□□□ 0.3
PTPRK-222ENST00000532751 ATP5G2Q06055 141 aa16.95■□□□□ 0.3
PTPRK-222ENST00000532751 KLF9Q13886 244 aaPredicted RBP16.95■□□□□ 0.3
PTPRK-222ENST00000532751 TRIM16LQ309B1 348 aa16.95■□□□□ 0.3
PTPRK-222ENST00000532751 C9orf66Q5T8R8 295 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms