RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 CADM3Q8N126 398 aa19.37■□□□□ 0.69
USP48-214ENST00000532737 OR5T1Q8NG75 326 aa19.37■□□□□ 0.69
USP48-214ENST00000532737 CASTOR1Q8WTX7 329 aa19.37■□□□□ 0.69
USP48-214ENST00000532737 ZFP57Q9NU63 452 aa19.37■□□□□ 0.69
USP48-214ENST00000532737 A0A1B0GW64 132 aa19.36■□□□□ 0.69
USP48-214ENST00000532737 B3GALNT1O75752 331 aa19.36■□□□□ 0.69
USP48-214ENST00000532737 OR9G9P0C7N8 305 aa19.36■□□□□ 0.69
USP48-214ENST00000532737 AKR1C4P17516 323 aa19.36■□□□□ 0.69
USP48-214ENST00000532737 RPL27AP46776 148 aaKnown RBP19.36■□□□□ 0.69
USP48-214ENST00000532737 ZNF846Q147U1 533 aa19.36■□□□□ 0.69
USP48-214ENST00000532737 TRIM16LQ309B1 348 aa19.36■□□□□ 0.69
USP48-214ENST00000532737 GLYATL2Q8WU03 294 aa19.36■□□□□ 0.69
USP48-214ENST00000532737 TMEM68Q96MH6 324 aa19.36■□□□□ 0.69
USP48-214ENST00000532737 PHB2Q99623 299 aa19.36■□□□□ 0.69
USP48-214ENST00000532737 C7orf50Q9BRJ6 194 aaKnown RBP19.36■□□□□ 0.69
USP48-214ENST00000532737 WNK1Q9H4A3 2382 aa19.36■□□□□ 0.69
USP48-214ENST00000532737 BTCP35070 178 aa19.35■□□□□ 0.69
USP48-214ENST00000532737 KIAA0141Q14154 515 aaPredicted RBP19.35■□□□□ 0.69
USP48-214ENST00000532737 TMEM65Q6PI78 240 aa19.35■□□□□ 0.69
USP48-214ENST00000532737 TMED4Q7Z7H5 227 aa19.35■□□□□ 0.69
USP48-214ENST00000532737 SGPP2Q8IWX5 399 aa19.35■□□□□ 0.69
USP48-214ENST00000532737 OR5M8Q8NGP6 311 aa19.35■□□□□ 0.69
USP48-214ENST00000532737 MYOZ3Q8TDC0 251 aa19.35■□□□□ 0.69
USP48-214ENST00000532737 FYTTD1Q96QD9 318 aaKnown RBP19.35■□□□□ 0.69
USP48-214ENST00000532737 SPIN2AQ99865 258 aa19.35■□□□□ 0.69
USP48-214ENST00000532737 SPIN2BQ9BPZ2 258 aa19.35■□□□□ 0.69
USP48-214ENST00000532737 WDR12Q9GZL7 423 aaKnown RBP19.35■□□□□ 0.69
USP48-214ENST00000532737 TMEM222Q9H0R3 208 aa19.35■□□□□ 0.69
USP48-214ENST00000532737 NSG2Q9Y328 171 aa19.35■□□□□ 0.69
USP48-214ENST00000532737 HMX3A6NHT5 357 aa19.34■□□□□ 0.69
USP48-214ENST00000532737 CGB1A6NKQ9 187 aa19.34■□□□□ 0.69
USP48-214ENST00000532737 CENPXA8MT69 81 aa19.34■□□□□ 0.69
USP48-214ENST00000532737 TEX22C9J3V5 150 aa19.34■□□□□ 0.69
USP48-214ENST00000532737 IGKV1-5P01602 117 aa19.34■□□□□ 0.69
USP48-214ENST00000532737 RAB9AP51151 201 aa19.34■□□□□ 0.69
USP48-214ENST00000532737 OR2B8PP59922 312 aa19.34■□□□□ 0.69
USP48-214ENST00000532737 VWFP04275 2813 aa19.33■□□□□ 0.69
USP48-214ENST00000532737 SNAPC5O75971 98 aa19.33■□□□□ 0.68
USP48-214ENST00000532737 CDS2O95674 445 aa19.33■□□□□ 0.68
USP48-214ENST00000532737 SUPT4H1P63272 117 aaKnown RBP19.33■□□□□ 0.68
USP48-214ENST00000532737 DHODHQ02127 395 aa19.33■□□□□ 0.68
USP48-214ENST00000532737 RBMS2Q15434 407 aaKnown RBP19.33■□□□□ 0.68
USP48-214ENST00000532737 H2BFWTQ7Z2G1 175 aa19.33■□□□□ 0.68
USP48-214ENST00000532737 LHFPL5Q8TAF8 219 aa19.33■□□□□ 0.68
USP48-214ENST00000532737 GALNT14Q96FL9 552 aa19.33■□□□□ 0.68
USP48-214ENST00000532737 MS4A10Q96PG2 267 aa19.33■□□□□ 0.68
USP48-214ENST00000532737 KCNIP3Q9Y2W7 256 aa19.33■□□□□ 0.68
USP48-214ENST00000532737 NDUFB6O95139 128 aa19.32■□□□□ 0.68
USP48-214ENST00000532737 FGF2P09038 288 aa19.32■□□□□ 0.68
USP48-214ENST00000532737 IZUMO4Q1ZYL8 232 aa19.32■□□□□ 0.68
USP48-214ENST00000532737 FAM110DQ8TAY7 271 aaPredicted RBP19.32■□□□□ 0.68
USP48-214ENST00000532737 COMMD5Q9GZQ3 224 aa19.32■□□□□ 0.68
USP48-214ENST00000532737 PRR13Q9NZ81 148 aa19.32■□□□□ 0.68
USP48-214ENST00000532737 TEX50A0A1B0GTY4 177 aa19.31■□□□□ 0.68
USP48-214ENST00000532737 DBX1A6NMT0 343 aa19.31■□□□□ 0.68
USP48-214ENST00000532737 LYRM1O43325 122 aa19.31■□□□□ 0.68
USP48-214ENST00000532737 P0C879 139 aa19.31■□□□□ 0.68
USP48-214ENST00000532737 CDX1P47902 265 aaPredicted RBP19.31■□□□□ 0.68
USP48-214ENST00000532737 TMEM187Q14656 261 aa19.31■□□□□ 0.68
USP48-214ENST00000532737 ZNF695Q8IW36 515 aa19.31■□□□□ 0.68
USP48-214ENST00000532737 SELENOHQ8IZQ5 122 aaKnown RBP19.31■□□□□ 0.68
USP48-214ENST00000532737 ZNF491Q8N8L2 437 aa19.31■□□□□ 0.68
USP48-214ENST00000532737 KLHL30-AS1Q8NEE0 82 aa19.31■□□□□ 0.68
USP48-214ENST00000532737 TSC22D3Q99576 134 aa19.31■□□□□ 0.68
USP48-214ENST00000532737 ZNF355PQ9NSJ1 428 aa19.31■□□□□ 0.68
USP48-214ENST00000532737 NUDT19A8MXV4 375 aa19.3■□□□□ 0.68
USP48-214ENST00000532737 ATG12O94817 140 aa19.3■□□□□ 0.68
USP48-214ENST00000532737 AKR1C2P52895 323 aa19.3■□□□□ 0.68
USP48-214ENST00000532737 C8orf86Q6ZUL3 223 aa19.3■□□□□ 0.68
USP48-214ENST00000532737 TTC9CQ8N5M4 171 aa19.3■□□□□ 0.68
USP48-214ENST00000532737 OR4F17Q8NGA8 305 aa19.3■□□□□ 0.68
USP48-214ENST00000532737 OR4F4Q96R69 305 aa19.3■□□□□ 0.68
USP48-214ENST00000532737 COA4Q9NYJ1 87 aa19.3■□□□□ 0.68
USP48-214ENST00000532737 PRNDQ9UKY0 176 aa19.3■□□□□ 0.68
USP48-214ENST00000532737 FLVCR2Q9UPI3 526 aa19.3■□□□□ 0.68
USP48-214ENST00000532737 OR51B2Q9Y5P1 312 aa19.3■□□□□ 0.68
USP48-214ENST00000532737 TGP01266 2768 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 A0A0G2JRQ6 117 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 C15orf61A6NNL5 157 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 UPK1BO75841 260 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 AREGP15514 252 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 TMEM128Q5BJH2 165 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 TMEM268Q5VZI3 342 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 SLC25A42Q86VD7 318 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 CENPSQ8N2Z9 138 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 UBE2E2Q96LR5 201 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 TMEM56Q96MV1 263 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 GNB4Q9HAV0 340 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 TMEM14BQ9NUH8 114 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 TBC1D24Q9ULP9 559 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 TMEM56-RWDD3S4R434 201 aa19.29■□□□□ 0.68
USP48-214ENST00000532737 H3BUA1 57 aa19.28■□□□□ 0.68
USP48-214ENST00000532737 TRGV3P03979 118 aa19.28■□□□□ 0.68
USP48-214ENST00000532737 TPPP2P59282 170 aa19.28■□□□□ 0.68
USP48-214ENST00000532737 IFITM3Q01628 133 aa19.28■□□□□ 0.68
USP48-214ENST00000532737 TREML4Q6UXN2 200 aa19.28■□□□□ 0.68
USP48-214ENST00000532737 C19orf35Q6ZS72 473 aa19.28■□□□□ 0.68
USP48-214ENST00000532737 OR1L8Q8NGR8 309 aa19.28■□□□□ 0.68
USP48-214ENST00000532737 OR4A16Q8NH70 328 aa19.28■□□□□ 0.68
USP48-214ENST00000532737 RBPMSQ93062 196 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms