RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 RPL27AP46776 148 aaKnown RBP15.39■□□□□ 0.05
CPSF1-209ENST00000532725 TPPP2P59282 170 aa15.39■□□□□ 0.05
CPSF1-209ENST00000532725 FHL3Q13643 280 aa15.39■□□□□ 0.05
CPSF1-209ENST00000532725 C1QL4Q86Z23 238 aa15.39■□□□□ 0.05
CPSF1-209ENST00000532725 OR11H1Q8NG94 326 aa15.39■□□□□ 0.05
CPSF1-209ENST00000532725 OR51S1Q8NGJ8 323 aa15.39■□□□□ 0.05
CPSF1-209ENST00000532725 TRIM63Q969Q1 353 aa15.39■□□□□ 0.05
CPSF1-209ENST00000532725 OR5B12Q96R08 314 aa15.39■□□□□ 0.05
CPSF1-209ENST00000532725 RTBDNQ9BSG5 229 aaPredicted RBP15.39■□□□□ 0.05
CPSF1-209ENST00000532725 HMX3A6NHT5 357 aa15.38■□□□□ 0.05
CPSF1-209ENST00000532725 CGB1A6NKQ9 187 aa15.38■□□□□ 0.05
CPSF1-209ENST00000532725 IGKV1-39P01597 117 aa15.38■□□□□ 0.05
CPSF1-209ENST00000532725 IGKV1D-39P04432 117 aa15.38■□□□□ 0.05
CPSF1-209ENST00000532725 IGLL1P15814 213 aa15.38■□□□□ 0.05
CPSF1-209ENST00000532725 G6PCP35575 357 aa15.38■□□□□ 0.05
CPSF1-209ENST00000532725 ECI1P42126 302 aa15.38■□□□□ 0.05
CPSF1-209ENST00000532725 ERVK-16P61578 105 aa15.38■□□□□ 0.05
CPSF1-209ENST00000532725 KLF9Q13886 244 aaPredicted RBP15.38■□□□□ 0.05
CPSF1-209ENST00000532725 SURF2Q15527 256 aaPredicted RBP15.38■□□□□ 0.05
CPSF1-209ENST00000532725 SPANXN2Q5MJ10 180 aa15.38■□□□□ 0.05
CPSF1-209ENST00000532725 OR1N2Q8NGR9 330 aa15.38■□□□□ 0.05
CPSF1-209ENST00000532725 PRRT1Q99946 306 aa15.38■□□□□ 0.05
CPSF1-209ENST00000532725 ALX4Q9H161 411 aaPredicted RBP15.38■□□□□ 0.05
CPSF1-209ENST00000532725 SLC2A8Q9NY64 477 aa15.38■□□□□ 0.05
CPSF1-209ENST00000532725 GPR132Q9UNW8 380 aa15.38■□□□□ 0.05
CPSF1-209ENST00000532725 RBMXL2O75526 392 aaKnown RBP15.37■□□□□ 0.05
CPSF1-209ENST00000532725 OR2B8PP59922 312 aa15.37■□□□□ 0.05
CPSF1-209ENST00000532725 RCC1LQ96I51 464 aaKnown RBP15.37■□□□□ 0.05
CPSF1-209ENST00000532725 SEC22AQ96IW7 307 aa15.37■□□□□ 0.05
CPSF1-209ENST00000532725 FYTTD1Q96QD9 318 aaKnown RBP15.37■□□□□ 0.05
CPSF1-209ENST00000532725 SRRQ9GZT4 340 aa15.37■□□□□ 0.05
CPSF1-209ENST00000532725 C5orf66Q9H5L9 145 aa15.37■□□□□ 0.05
CPSF1-209ENST00000532725 COA4Q9NYJ1 87 aa15.37■□□□□ 0.05
CPSF1-209ENST00000532725 COPZ2Q9P299 210 aa15.37■□□□□ 0.05
CPSF1-209ENST00000532725 C3orf85A0A1B0GTC6 90 aa15.36■□□□□ 0.05
CPSF1-209ENST00000532725 A6NHS1 94 aa15.36■□□□□ 0.05
CPSF1-209ENST00000532725 IGHV3-11P01762 117 aa15.36■□□□□ 0.05
CPSF1-209ENST00000532725 LGALS1P09382 135 aaKnown RBP15.36■□□□□ 0.05
CPSF1-209ENST00000532725 BEAN1Q3B7T3 259 aa15.36■□□□□ 0.05
CPSF1-209ENST00000532725 KPRPQ5T749 579 aaPredicted RBP15.36■□□□□ 0.05
CPSF1-209ENST00000532725 TP53RKQ96S44 253 aa15.36■□□□□ 0.05
CPSF1-209ENST00000532725 SCP2D1Q9UJQ7 156 aa15.36■□□□□ 0.05
CPSF1-209ENST00000532725 TRBV9A0A0B4J1U6 114 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 A0A0G2JLM5 398 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 TEX50A0A1B0GTY4 177 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 NPIPB5A8MRT5 1133 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 H0Y980 276 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 PRH1P02810 166 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 SERPINE2P07093 398 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 CRYGCP07315 174 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 DEFA6Q01524 100 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 ZNF45Q02386 682 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 ZNF616Q08AN1 781 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 SLC25A42Q86VD7 318 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 TOMM5Q8N4H5 51 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 GDPD1Q8N9F7 314 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 CCDC71LQ8N9Z2 235 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 COMMD5Q9GZQ3 224 aa15.35■□□□□ 0.05
CPSF1-209ENST00000532725 C13orf42A0A1B0GVH6 325 aa15.34■□□□□ 0.05
CPSF1-209ENST00000532725 DUS4LO95620 317 aaKnown RBP15.34■□□□□ 0.05
CPSF1-209ENST00000532725 AREGP15514 252 aa15.34■□□□□ 0.05
CPSF1-209ENST00000532725 AP3S2P59780 193 aa15.34■□□□□ 0.05
CPSF1-209ENST00000532725 SP6Q3SY56 376 aa15.34■□□□□ 0.05
CPSF1-209ENST00000532725 USMG5Q96IX5 58 aa15.34■□□□□ 0.05
CPSF1-209ENST00000532725 MCUBQ9NWR8 336 aa15.34■□□□□ 0.05
CPSF1-209ENST00000532725 C14orf166Q9Y224 244 aaKnown RBP15.34■□□□□ 0.05
CPSF1-209ENST00000532725 ZNF257Q9Y2Q1 563 aa15.34■□□□□ 0.05
CPSF1-209ENST00000532725 NSG2Q9Y328 171 aa15.34■□□□□ 0.05
CPSF1-209ENST00000532725 SNAPC5O75971 98 aa15.33■□□□□ 0.04
CPSF1-209ENST00000532725 HSPB1P04792 205 aaKnown RBP15.33■□□□□ 0.04
CPSF1-209ENST00000532725 CTRB1P17538 263 aa15.33■□□□□ 0.04
CPSF1-209ENST00000532725 PSMB6P28072 239 aa15.33■□□□□ 0.04
CPSF1-209ENST00000532725 RAB25P57735 213 aa15.33■□□□□ 0.04
CPSF1-209ENST00000532725 BAK1Q16611 211 aa15.33■□□□□ 0.04
CPSF1-209ENST00000532725 KLK9Q2XQG4 91 aa15.33■□□□□ 0.04
CPSF1-209ENST00000532725 CTRB2Q6GPI1 263 aa15.33■□□□□ 0.04
CPSF1-209ENST00000532725 DEDD2Q8WXF8 326 aa15.33■□□□□ 0.04
CPSF1-209ENST00000532725 DPF1Q92782 380 aa15.33■□□□□ 0.04
CPSF1-209ENST00000532725 SDHCQ99643 169 aaPredicted RBP15.33■□□□□ 0.04
CPSF1-209ENST00000532725 AKIP1Q9NQ31 210 aa15.33■□□□□ 0.04
CPSF1-209ENST00000532725 NDUFA4L2Q9NRX3 87 aa15.33■□□□□ 0.04
CPSF1-209ENST00000532725 KLK9Q9UKQ9 250 aa15.33■□□□□ 0.04
CPSF1-209ENST00000532725 IGHV4OR15-8A0A075B7B6 117 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 A0A087WW49 117 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 IGLC7A0M8Q6 106 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 LINC01619G3V211 115 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 B3GALNT1O75752 331 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 OR8U8P0C7N1 319 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 UCP1P25874 307 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 FAUP35544 74 aaKnown RBP15.32■□□□□ 0.04
CPSF1-209ENST00000532725 RHOGP84095 191 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 DEFA5Q01523 94 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 C19orf35Q6ZS72 473 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 H2BFWTQ7Z2G1 175 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 OR1L8Q8NGR8 309 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 SCGB3A2Q96PL1 93 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 FANCD2OSQ96PS1 177 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 TSC22D3Q99576 134 aa15.32■□□□□ 0.04
CPSF1-209ENST00000532725 SRSF8Q9BRL6 282 aaKnown RBP15.32■□□□□ 0.04
CPSF1-209ENST00000532725 MCRIP2Q9BUT9 160 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms