RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ELOBQ15370 118 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 NHLRC2Q8NBF2 726 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 NPIPB3Q92617 1050 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 GCHFRP30047 84 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 FCER1GP30273 86 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 BSPH1Q075Z2 132 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 TFF3Q07654 80 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 ZNF343Q6P1L6 599 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 ZNF788Q6ZQV5 615 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 MDS2Q8NDY4 140 aa12.86□□□□□ -0.35
PCDHA3-202ENST00000532566 YPEL1O60688 119 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 LIPFP07098 398 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 EGR1P18146 543 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 CRYBB3P26998 211 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 YPEL2Q96QA6 119 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 C17orf100A8MU93 164 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 GFRA3O60609 400 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 MEF2CQ06413 473 aaPredicted RBP12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 BPIFA4PQ86YQ2 179 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 OR51G1Q8NGK1 321 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 LINC01560Q8TB33 94 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 IGHV1-18A0A0C4DH31 117 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 LY6G6EA0A0G2JKS1 128 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 IL6RP08887 468 aaPredicted RBP12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 OR5AL1P0C617 328 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 NHLH1Q02575 133 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 CYP2G1PQ6ZSU1 146 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 U3KQA8 63 aa12.85□□□□□ -0.35
PCDHA3-202ENST00000532566 VENTXO95231 258 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 OR4A5Q8NH83 315 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 ORM1P02763 201 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 REG1AP05451 166 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 NUBP1P53384 320 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 PRNTQ86SH4 94 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 GBGT1Q8N5D6 347 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 OR5R1Q8NH85 324 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 CLDND2Q8NHS1 167 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 LINC00312Q9Y6C7 94 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 FOXF2Q12947 444 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 LINC00518Q8N0U6 118 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 SNRNP40Q96DI7 357 aaKnown RBP12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 MRPL32Q9BYC8 188 aaKnown RBP12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 GPR61Q9BZJ8 451 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 WNK2Q9Y3S1 2297 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 TRAV34A0A0B4J273 112 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 IGHV3-48P01763 117 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 SRSF3P84103 164 aaKnown RBP12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 DNM1P46Q6ZS02 220 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 OR1P1Q8NH06 330 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 CYTL1Q9NRR1 136 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 NAGKQ9UJ70 344 aa12.84□□□□□ -0.35
PCDHA3-202ENST00000532566 HGFACQ04756 655 aa12.83□□□□□ -0.35
PCDHA3-202ENST00000532566 OR51M1Q9H341 326 aa12.83□□□□□ -0.35
PCDHA3-202ENST00000532566 OR2J3O76001 311 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 FAM106CPP0CH98 169 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 KIR2DL2P43627 348 aaPredicted RBP12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 SRSF4Q08170 494 aaKnown RBP12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 KLRB1Q12918 225 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 VAMP3Q15836 100 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 MORN2Q502X0 79 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 PNKDQ8N490 385 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 MRPL37Q9BZE1 423 aaKnown RBP12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 TMEM191AQ9H0A3 160 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 RRHO14718 337 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 CDX1P47902 265 aaPredicted RBP12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 PKIAP61925 76 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 RBM14Q96PK6 669 aaKnown RBP12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 CLEC5AQ9NY25 188 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 RAMP3O60896 148 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 TFF1P04155 84 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 FAM87AP0C7U9 286 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 TRGC1P0CF51 173 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 IFI27L2Q9H2X8 130 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 WFDC1Q9HC57 220 aa12.83□□□□□ -0.36
PCDHA3-202ENST00000532566 HLA-DQA1P01909 254 aa12.82□□□□□ -0.36
PCDHA3-202ENST00000532566 ZNF137PP52743 207 aa12.82□□□□□ -0.36
PCDHA3-202ENST00000532566 C19orf35Q6ZS72 473 aa12.82□□□□□ -0.36
PCDHA3-202ENST00000532566 PLSCR4Q9NRQ2 329 aa12.82□□□□□ -0.36
PCDHA3-202ENST00000532566 E9PLN8 166 aa12.82□□□□□ -0.36
PCDHA3-202ENST00000532566 PAFAH1B2P68402 229 aa12.82□□□□□ -0.36
PCDHA3-202ENST00000532566 RBFOX2O43251 390 aaKnown RBP eCLIP12.82□□□□□ -0.36
PCDHA3-202ENST00000532566 LOC105371242A0A075B767 164 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 TMSB15BA0A087X1C1 80 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 C11orf42Q8N5U0 333 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 CADP27708 2225 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 TRBV23-1A0A0A0MS06 115 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 TEX50A0A1B0GTY4 177 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 SRRM5B3KS81 715 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 SFRP2Q96HF1 295 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 M0R143 59 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 PSPNO60542 156 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 IGFBP2P18065 325 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 ZNF581Q9P0T4 197 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 MFAP4P55083 255 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 ASCL4Q6XD76 172 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 TUBA4BQ9H853 241 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 UFC1Q9Y3C8 167 aa12.81□□□□□ -0.36
PCDHA3-202ENST00000532566 SAA2-SAA4A0A096LPE2 208 aa12.8□□□□□ -0.36
PCDHA3-202ENST00000532566 SAA2P0DJI9 122 aaPredicted RBP12.8□□□□□ -0.36
PCDHA3-202ENST00000532566 FXYD3Q14802 87 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms