RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 DCTN2Q13561 401 aaKnown RBP17.66■□□□□ 0.42
CAPN1-222ENST00000532285 RNASE10Q5GAN6 216 aaKnown RBP17.66■□□□□ 0.42
CAPN1-222ENST00000532285 SLC38A6Q8IZM9 456 aa17.66■□□□□ 0.42
CAPN1-222ENST00000532285 NECAP1Q8NC96 275 aa17.66■□□□□ 0.42
CAPN1-222ENST00000532285 TMEM140Q9NV12 185 aa17.66■□□□□ 0.42
CAPN1-222ENST00000532285 A0A1B0GW64 132 aa17.65■□□□□ 0.42
CAPN1-222ENST00000532285 H3BMQ9 156 aa17.65■□□□□ 0.42
CAPN1-222ENST00000532285 LPAR6P43657 344 aa17.65■□□□□ 0.42
CAPN1-222ENST00000532285 MRPS10P82664 201 aaKnown RBP17.65■□□□□ 0.42
CAPN1-222ENST00000532285 PHLDA2Q53GA4 152 aa17.65■□□□□ 0.42
CAPN1-222ENST00000532285 SORL1Q92673 2214 aa17.65■□□□□ 0.42
CAPN1-222ENST00000532285 TRAV3A0A0B4J244 114 aa17.64■□□□□ 0.41
CAPN1-222ENST00000532285 MARCH11A6NNE9 402 aa17.64■□□□□ 0.41
CAPN1-222ENST00000532285 GABARAPH6UMI1 98 aa17.64■□□□□ 0.41
CAPN1-222ENST00000532285 DHFRP00374 187 aa17.64■□□□□ 0.41
CAPN1-222ENST00000532285 CD3DP04234 171 aa17.64■□□□□ 0.41
CAPN1-222ENST00000532285 ZNF585BQ52M93 769 aa17.64■□□□□ 0.41
CAPN1-222ENST00000532285 CADM3Q8N126 398 aa17.64■□□□□ 0.41
CAPN1-222ENST00000532285 ARRDC1Q8N5I2 433 aa17.64■□□□□ 0.41
CAPN1-222ENST00000532285 ISOC1Q96CN7 298 aa17.64■□□□□ 0.41
CAPN1-222ENST00000532285 ELOVL1Q9BW60 279 aa17.64■□□□□ 0.41
CAPN1-222ENST00000532285 COMMD5Q9GZQ3 224 aa17.64■□□□□ 0.41
CAPN1-222ENST00000532285 FAM212BQ9NTI7 297 aaPredicted RBP17.64■□□□□ 0.41
CAPN1-222ENST00000532285 RABL2AQ9UBK7 228 aaPredicted RBP17.64■□□□□ 0.41
CAPN1-222ENST00000532285 RABL2BQ9UNT1 228 aa17.64■□□□□ 0.41
CAPN1-222ENST00000532285 CRYGCP07315 174 aa17.63■□□□□ 0.41
CAPN1-222ENST00000532285 MYOD1P15172 320 aa17.63■□□□□ 0.41
CAPN1-222ENST00000532285 AREGP15514 252 aa17.63■□□□□ 0.41
CAPN1-222ENST00000532285 PSMB6P28072 239 aa17.63■□□□□ 0.41
CAPN1-222ENST00000532285 OR2B8PP59922 312 aa17.63■□□□□ 0.41
CAPN1-222ENST00000532285 SSBP1Q04837 148 aaKnown RBP17.63■□□□□ 0.41
CAPN1-222ENST00000532285 EXOSC2Q13868 293 aaKnown RBP17.63■□□□□ 0.41
CAPN1-222ENST00000532285 KLF5Q13887 457 aaPredicted RBP17.63■□□□□ 0.41
CAPN1-222ENST00000532285 TMEM229BQ8NBD8 167 aa17.63■□□□□ 0.41
CAPN1-222ENST00000532285 DIRAS2Q96HU8 199 aa17.63■□□□□ 0.41
CAPN1-222ENST00000532285 OR4C12Q96R67 309 aa17.63■□□□□ 0.41
CAPN1-222ENST00000532285 ZNF256Q9Y2P7 627 aaPredicted RBP17.63■□□□□ 0.41
CAPN1-222ENST00000532285 CGB1A6NKQ9 187 aa17.62■□□□□ 0.41
CAPN1-222ENST00000532285 OR2J3O76001 311 aa17.62■□□□□ 0.41
CAPN1-222ENST00000532285 KRASP01116 189 aa17.62■□□□□ 0.41
CAPN1-222ENST00000532285 RPA2P15927 270 aa17.62■□□□□ 0.41
CAPN1-222ENST00000532285 TAS2R19P59542 299 aa17.62■□□□□ 0.41
CAPN1-222ENST00000532285 FAM209BQ5JX69 171 aa17.62■□□□□ 0.41
CAPN1-222ENST00000532285 TBC1D26Q86UD7 250 aa17.62■□□□□ 0.41
CAPN1-222ENST00000532285 PRR25Q96S07 402 aa17.62■□□□□ 0.41
CAPN1-222ENST00000532285 SRSF8Q9BRL6 282 aaKnown RBP17.62■□□□□ 0.41
CAPN1-222ENST00000532285 TRBV12-3P01733 135 aa17.61■□□□□ 0.41
CAPN1-222ENST00000532285 CD74P04233 296 aa17.61■□□□□ 0.41
CAPN1-222ENST00000532285 CTRB1P17538 263 aa17.61■□□□□ 0.41
CAPN1-222ENST00000532285 TATDN3Q17R31 274 aa17.61■□□□□ 0.41
CAPN1-222ENST00000532285 RPEL1Q2QD12 228 aa17.61■□□□□ 0.41
CAPN1-222ENST00000532285 C15orf32Q32M92 178 aa17.61■□□□□ 0.41
CAPN1-222ENST00000532285 CTRB2Q6GPI1 263 aa17.61■□□□□ 0.41
CAPN1-222ENST00000532285 LHFPL1Q86WI0 220 aa17.61■□□□□ 0.41
CAPN1-222ENST00000532285 OR6Q1Q8NGQ2 317 aa17.61■□□□□ 0.41
CAPN1-222ENST00000532285 ZNF486Q96H40 463 aaPredicted RBP17.61■□□□□ 0.41
CAPN1-222ENST00000532285 C6orf62Q9GZU0 229 aaPredicted RBP17.61■□□□□ 0.41
CAPN1-222ENST00000532285 FBXL7Q9UJT9 491 aa17.61■□□□□ 0.41
CAPN1-222ENST00000532285 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.6■□□□□ 0.41
CAPN1-222ENST00000532285 CTDSPLO15194 276 aa17.6■□□□□ 0.41
CAPN1-222ENST00000532285 PGAM2P15259 253 aa17.6■□□□□ 0.41
CAPN1-222ENST00000532285 HIST1H1BP16401 226 aaKnown RBP17.6■□□□□ 0.41
CAPN1-222ENST00000532285 G6PCP35575 357 aa17.6■□□□□ 0.41
CAPN1-222ENST00000532285 IL18Q14116 193 aa17.6■□□□□ 0.41
CAPN1-222ENST00000532285 KLK9Q2XQG4 91 aa17.6■□□□□ 0.41
CAPN1-222ENST00000532285 THOC7Q6I9Y2 204 aaKnown RBP17.6■□□□□ 0.41
CAPN1-222ENST00000532285 STEAP1BQ6NZ63 245 aa17.6■□□□□ 0.41
CAPN1-222ENST00000532285 SMIM4Q8WVI0 70 aa17.6■□□□□ 0.41
CAPN1-222ENST00000532285 FANCD2OSQ96PS1 177 aa17.6■□□□□ 0.41
CAPN1-222ENST00000532285 QTRT1Q9BXR0 403 aaKnown RBP17.6■□□□□ 0.41
CAPN1-222ENST00000532285 SLIRPQ9GZT3 109 aaKnown RBP17.6■□□□□ 0.41
CAPN1-222ENST00000532285 KLK9Q9UKQ9 250 aa17.6■□□□□ 0.41
CAPN1-222ENST00000532285 CEPT1Q9Y6K0 416 aa17.6■□□□□ 0.41
CAPN1-222ENST00000532285 SNAPC5O75971 98 aa17.59■□□□□ 0.41
CAPN1-222ENST00000532285 LY86O95711 162 aa17.59■□□□□ 0.41
CAPN1-222ENST00000532285 RAB3DO95716 219 aa17.59■□□□□ 0.41
CAPN1-222ENST00000532285 REG1AP05451 166 aa17.59■□□□□ 0.41
CAPN1-222ENST00000532285 DEFA4P12838 97 aa17.59■□□□□ 0.41
CAPN1-222ENST00000532285 PTBP1P26599 531 aaKnown RBP eCLIP17.59■□□□□ 0.41
CAPN1-222ENST00000532285 SYNJ2BPP57105 145 aa17.59■□□□□ 0.41
CAPN1-222ENST00000532285 RND3P61587 244 aa17.59■□□□□ 0.41
CAPN1-222ENST00000532285 C19orf35Q6ZS72 473 aa17.59■□□□□ 0.41
CAPN1-222ENST00000532285 OR4D10Q8NGI6 311 aa17.59■□□□□ 0.41
CAPN1-222ENST00000532285 OR9G4Q8NGQ1 327 aa17.59■□□□□ 0.41
CAPN1-222ENST00000532285 TERB2Q8NHR7 220 aa17.59■□□□□ 0.41
CAPN1-222ENST00000532285 TEX50A0A1B0GTY4 177 aa17.58■□□□□ 0.4
CAPN1-222ENST00000532285 IGLC7A0M8Q6 106 aa17.58■□□□□ 0.4
CAPN1-222ENST00000532285 TRAPPC2P0DI81 140 aa17.58■□□□□ 0.4
CAPN1-222ENST00000532285 TRAPPC2BP0DI82 140 aa17.58■□□□□ 0.4
CAPN1-222ENST00000532285 HSD17B13Q7Z5P4 300 aaPredicted RBP17.58■□□□□ 0.4
CAPN1-222ENST00000532285 OR1L8Q8NGR8 309 aa17.58■□□□□ 0.4
CAPN1-222ENST00000532285 LSM4Q9Y4Z0 139 aaKnown RBP17.58■□□□□ 0.4
CAPN1-222ENST00000532285 COL7A1Q02388 2944 aa17.58■□□□□ 0.4
CAPN1-222ENST00000532285 BMPR1BO00238 502 aa17.57■□□□□ 0.4
CAPN1-222ENST00000532285 MEF2DQ14814 521 aa17.57■□□□□ 0.4
CAPN1-222ENST00000532285 ZFAND1Q8TCF1 268 aa17.57■□□□□ 0.4
CAPN1-222ENST00000532285 TSC22D3Q99576 134 aa17.57■□□□□ 0.4
CAPN1-222ENST00000532285 NXF2Q9GZY0 626 aaKnown RBP17.57■□□□□ 0.4
CAPN1-222ENST00000532285 FKBP11Q9NYL4 201 aa17.57■□□□□ 0.4
CAPN1-222ENST00000532285 PRNDQ9UKY0 176 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms