RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 FRZBQ92765 325 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 RDH12Q96NR8 316 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 ERMAPQ96PL5 475 aaPredicted RBP2.4□□□□□ -2.03
PTPRK-220ENST00000531466 METTL26Q96S19 204 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 NRTNQ99748 197 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 THTPAQ9BU02 230 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 TMEM147Q9BVK8 224 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 TM2D1Q9BX74 207 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 C1QTNF6Q9BXI9 259 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 MRPL20Q9BYC9 149 aaKnown RBP2.4□□□□□ -2.03
PTPRK-220ENST00000531466 REG4Q9BYZ8 158 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 RNASE7Q9H1E1 156 aaKnown RBP2.4□□□□□ -2.03
PTPRK-220ENST00000531466 TMEM133Q9H2Q1 129 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 RPRMQ9NS64 109 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 BET1LQ9NYM9 111 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 SHPKQ9UHJ6 478 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 POMPQ9Y244 141 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 FIS1Q9Y3D6 152 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 IER3IP1Q9Y5U9 82 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 ABCC3O15438 1527 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 WDR62O43379 1518 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 ABCC2Q92887 1545 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 RTEL1-TNFRSF6BF6WH68 1400 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 USP6P35125 1406 aa2.4□□□□□ -2.03
PTPRK-220ENST00000531466 UGGT2Q9NYU1 1516 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 IGLV3-22A0A075B6J6 115 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 TRBV19A0A075B6N1 114 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 hCG_1818297A0A087WSY0 165 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 LOC102724200A0A096LPH7 203 aaPredicted RBP2.39□□□□□ -2.03
PTPRK-220ENST00000531466 A0A1B0GW64 132 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 A0A1W2PRS3 328 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 C7orf71A4D174 169 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 KNCNA6PVL3 124 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF850A8MQ14 1090 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 A8MT66 165 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF705EA8MWA4 302 aaPredicted RBP2.39□□□□□ -2.03
PTPRK-220ENST00000531466 FNDC10F2Z333 226 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 H7BYZ3 331 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 J3QRK9 145 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 J3QT63 122 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 K7EMT4 169 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 SLC17A2O00624 439 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 OVOL1O14753 267 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 NPFFO15130 113 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 DEDDO75618 318 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 CA2P00918 260 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 TNFP01375 233 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 HLA-DRB1P01911 266 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 HSPB1P04792 205 aaKnown RBP2.39□□□□□ -2.03
PTPRK-220ENST00000531466 ATP5G1P05496 136 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 IGKV5-2P06315 115 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 CD14P08571 375 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 LINC00032P0C843 101 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 OR12D1P0DN82 309 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 LAMP1P11279 417 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 PPIBP23284 216 aaKnown RBP2.39□□□□□ -2.03
PTPRK-220ENST00000531466 RBMXP38159 391 aaKnown RBP2.39□□□□□ -2.03
PTPRK-220ENST00000531466 CCR2P41597 374 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 LPAR6P43657 344 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 PSMB2P49721 201 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 AKR1C2P52895 323 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 LIM2P55344 173 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 TAS2R46P59540 309 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 C1QTNF8P60827 252 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 BTG2P78543 158 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 HLA-DRB3P79483 266 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF92Q03936 586 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 LOXL1Q08397 574 aaPredicted RBP2.39□□□□□ -2.03
PTPRK-220ENST00000531466 DHRS2Q13268 280 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 HMGN3Q15651 99 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 TMEM183BQ1AE95 376 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 Q499Y3 187 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 FAM120AOSQ5T036 256 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 TSPO2Q5TGU0 170 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 Q6Q795 121 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 SBSNQ6UWP8 590 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 DGAT2L6Q6ZPD8 337 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 TMEM179BQ7Z7N9 219 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 SGPP2Q8IWX5 399 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 C9orf40Q8IXQ3 194 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 FTMTQ8N4E7 242 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 TTC9CQ8N5M4 171 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 COPS9Q8WXC6 57 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 PSMF1Q92530 271 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 OR4C12Q96R67 309 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 VAMP8Q9BV40 100 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 RTL8AQ9BWD3 113 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 GGTLC1Q9BX51 225 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 MRPL32Q9BYC8 188 aaKnown RBP2.39□□□□□ -2.03
PTPRK-220ENST00000531466 DPY30Q9C005 99 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 EIF5A2Q9GZV4 153 aaKnown RBP2.39□□□□□ -2.03
PTPRK-220ENST00000531466 SLC25A31Q9H0C2 315 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF331Q9NQX6 463 aaPredicted RBP2.39□□□□□ -2.03
PTPRK-220ENST00000531466 PARP11Q9NR21 331 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 CBLN4Q9NTU7 201 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 ORC6Q9Y5N6 252 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 TECPR2O15040 1411 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 ABCC5O15440 1437 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 DCCP43146 1447 aa2.39□□□□□ -2.03
PTPRK-220ENST00000531466 A2ML1A8K2U0 1454 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms