RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 CMC4P56277 68 aaPredicted RBP5.86□□□□□ -1.47
CD44-232ENST00000531118 KRTAP10-2P60368 255 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 SNRPGP62308 76 aaKnown RBP5.86□□□□□ -1.47
CD44-232ENST00000531118 IRF3Q14653 427 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 OR2G6Q5TZ20 316 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 MEDAGQ5VYS4 303 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 MORN3Q6PF18 240 aaPredicted RBP5.86□□□□□ -1.47
CD44-232ENST00000531118 PLET1Q6UQ28 207 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 CLRN3Q8NCR9 226 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 OSR1Q8TAX0 266 aaPredicted RBP5.86□□□□□ -1.47
CD44-232ENST00000531118 RNF2Q99496 336 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 NICN1Q9BSH3 213 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 KRTAP9-9Q9BYP9 154 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 KRTAP9-4Q9BYQ2 154 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 CKLFQ9UBR5 152 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 ETV7Q9Y603 341 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 FAT3Q8TDW7 4589 aa5.86□□□□□ -1.47
CD44-232ENST00000531118 DNAH8Q96JB1 4490 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 IGKV3-7A0A075B6H7 116 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 IGHV3OR16-8A0A075B7F1 116 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 TRBV5-5A0A0J9YX44 114 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 NBDYA0A0U1RRE5 68 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 E7EUB6 86 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 NDUFA4O00483 81 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 EI24O14681 340 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 ALPLP05186 524 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 REG1AP05451 166 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 ZNF735P0CB33 412 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 TMEM41BQ5BJD5 291 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 LIPKQ5VXJ0 399 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 LEMD1Q68G75 181 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 SSX9Q7RTT3 188 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 FRZBQ92765 325 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 FAM210BQ96KR6 192 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 Q96MT0 163 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 OR2A7Q96R45 310 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 C20orf24Q9BUV8 137 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 RNF167Q9H6Y7 350 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 SLC2A9Q9NRM0 540 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 TBC1D24Q9ULP9 559 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 MGAT4AQ9UM21 535 aa5.85□□□□□ -1.47
CD44-232ENST00000531118 OR2T8A6NH00 312 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 LINC00473A8K010 186 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 KBTBD11O94819 623 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 DUTP33316 252 aaKnown RBP5.84□□□□□ -1.47
CD44-232ENST00000531118 FAM3BP58499 235 aaPredicted RBP5.84□□□□□ -1.47
CD44-232ENST00000531118 TPBGQ13641 420 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 RNF151Q2KHN1 245 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 TRPT1Q86TN4 253 aaKnown RBP5.84□□□□□ -1.47
CD44-232ENST00000531118 STHQ8IWL8 128 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 LYPD1Q8N2G4 141 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 CBR4Q8N4T8 237 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 ZNF555Q8NEP9 628 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 GGHQ92820 318 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 SMIM19Q96E16 107 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 ADTRPQ96IZ2 230 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 TMEM59Q9BXS4 323 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 KCNK15Q9H427 330 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 S100A14Q9HCY8 104 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 Q9N2K0 584 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 C8orf4Q9NR00 106 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 AK3Q9UIJ7 227 aa5.84□□□□□ -1.47
CD44-232ENST00000531118 TRBV5-7A0A0A0MS05 114 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 IGHV7-4-1A0A0J9YVY3 117 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 K7EMT4 169 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 CHEK1O14757 476 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 SPP1P10451 314 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 DEFA4P12838 97 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 SRMP19623 302 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 NPY1RP25929 384 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 PSMD7P51665 324 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 DEFB131AP59861 70 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 ZIK1Q3SY52 487 aaPredicted RBP5.83□□□□□ -1.48
CD44-232ENST00000531118 Q499Y3 187 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 CCDC58Q4VC31 144 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 OR10K2Q6IF99 312 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 RPL22L1Q6P5R6 122 aaKnown RBP5.83□□□□□ -1.48
CD44-232ENST00000531118 PQLC1Q8N2U9 271 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 GBGT1Q8N5D6 347 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 FAM24BQ8N5W8 94 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 NKAIN3Q8N8D7 197 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 OR6M1Q8NGM8 313 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 BSCL2Q96G97 398 aaPredicted RBP5.83□□□□□ -1.48
CD44-232ENST00000531118 CABLES2Q9BTV7 478 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 TM2D1Q9BX74 207 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 YTHDF1Q9BYJ9 559 aaKnown RBP5.83□□□□□ -1.48
CD44-232ENST00000531118 RIMS4Q9H426 269 aaPredicted RBP5.83□□□□□ -1.48
CD44-232ENST00000531118 C12orf4Q9NQ89 552 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 TMEM14BQ9NUH8 114 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 CLEC5AQ9NY25 188 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 AASSQ9UDR5 926 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 SMPXQ9UHP9 88 aa5.83□□□□□ -1.48
CD44-232ENST00000531118 LRP1Q07954 4544 aaKnown RBP5.83□□□□□ -1.48
CD44-232ENST00000531118 IGHV3-49A0A0A0MS15 119 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 A0A0A6YYD4 124 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 LOC100130705A0A1B0GUX0 176 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 CGB1A6NKQ9 187 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 C15orf62A8K5M9 175 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 FCGR3BO75015 233 aa5.82□□□□□ -1.48
CD44-232ENST00000531118 DFFBO76075 338 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms