RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ID4P47928 161 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 ZNF134P52741 427 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 CCL8P80075 99 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 ICAM4Q14773 271 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 TMEM177Q53S58 311 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 RPL39P5Q59GN2 51 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 CTRB2Q6GPI1 263 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 TCF23Q7RTU1 214 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 PDPNQ86YL7 162 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 CBLN2Q8IUK8 224 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 LYG1Q8N1E2 194 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 FAM216BQ8N7L0 139 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 OR5AN1Q8NGI8 311 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 NANPQ8TBE9 248 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 LHX4Q969G2 390 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 TVP23CQ96ET8 276 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 SSX3Q99909 188 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 C19orf24Q9BVV8 132 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 QTRT1Q9BXR0 403 aaKnown RBP4.55□□□□□ -1.68
PCF11-205ENST00000530906 NPCDR1Q9BY65 106 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 NPVFQ9HCQ7 196 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 RPS10P5Q9NQ39 176 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 SLC39A9Q9NUM3 307 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 TCF19Q9Y242 345 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 ARL2-SNX15V9GYD0 113 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 CADP27708 2225 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 PRR14LQ5THK1 2151 aa4.55□□□□□ -1.68
PCF11-205ENST00000530906 WDFY4Q6ZS81 3184 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.54□□□□□ -1.68
PCF11-205ENST00000530906 A0A1W2PN81 502 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 hCG_1809904A0A1W2PP81 198 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 A0A1W2PPE2 198 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 A0A1W2PR64 198 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 A0A1W2PRV1 198 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 COLCA2A8K830 154 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 C1orf196B1AJZ1 125 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 PRSS46E5RG02 174 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 E7EQL1 145 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 H3BQ15 152 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 UPK2O00526 184 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 NUPL2O15504 423 aaKnown RBP4.54□□□□□ -1.68
PCF11-205ENST00000530906 PDE6DO43924 150 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 KBTBD11O94819 623 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 MT-CO2P00403 227 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 TFF1P04155 84 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 OR9G9P0C7N8 305 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 USF1P22415 310 aaPredicted RBP4.54□□□□□ -1.68
PCF11-205ENST00000530906 NFYBP25208 207 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 NPY1RP25929 384 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 CHRNA7P36544 502 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 LGALS7P47929 136 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 HOXA1P49639 335 aaPredicted RBP4.54□□□□□ -1.68
PCF11-205ENST00000530906 RAB5BP61020 215 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 CCL20P78556 96 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 PRCDQ00LT1 54 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 MEF2BQ02080 365 aaPredicted RBP4.54□□□□□ -1.68
PCF11-205ENST00000530906 LTC4SQ16873 150 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 TMEM155Q4W5P6 130 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 SPRNQ5BIV9 151 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 FFAR4Q5NUL3 377 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 PRR31Q5SQ13 230 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 OR4A47Q6IF82 309 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 ADAM5Q6NVV9 412 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 TMEM88Q6PEY1 159 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 ETV3LQ6ZN32 361 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 PNKDQ8N490 385 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 RPP25LQ8N5L8 163 aaKnown RBP4.54□□□□□ -1.68
PCF11-205ENST00000530906 ZNF383Q8NA42 475 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 DEFB108BQ8NET1 73 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 SLC24A4Q8NFF2 622 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 OR10G9Q8NGN4 311 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 OR10G7Q8NGN6 311 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 OR4C13Q8NGP0 309 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 OR1L8Q8NGR8 309 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 OR13D1Q8NGV5 346 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 OR9G1Q8NH87 305 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 C8orf46Q8TAG6 207 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 CACNG8Q8WXS5 425 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 ZCCHC14Q8WYQ9 949 aaKnown RBP4.54□□□□□ -1.68
PCF11-205ENST00000530906 TMEM190Q8WZ59 177 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 BTF3L4Q96K17 158 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 TMEM204Q9BSN7 226 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 CTDSP1Q9GZU7 261 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 CHODLQ9H9P2 273 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 PLEKHA3Q9HB20 300 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 BIN3Q9NQY0 253 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 SLC35D1Q9NTN3 355 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 GNG13Q9P2W3 67 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 DMDP11532 3685 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 RAI1Q7Z5J4 1906 aaPredicted RBP4.54□□□□□ -1.68
PCF11-205ENST00000530906 PTPRZ1P23471 2315 aaPredicted RBP4.54□□□□□ -1.68
PCF11-205ENST00000530906 PTPRQQ9UMZ3 2332 aa4.54□□□□□ -1.68
PCF11-205ENST00000530906 HCFC1P51610 2035 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 F6UZH7 168 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 J3QR06 171 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 CCL21O00585 134 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 SLC31A2O15432 143 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 VENTXO95231 258 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 GOSR1O95249 250 aa4.53□□□□□ -1.68
PCF11-205ENST00000530906 IFNA4P05014 189 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms