RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ARL14EPLP0DKL9 152 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 FGF6P10767 208 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 IZUMO4Q1ZYL8 232 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 C10orf128Q5T292 105 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 C5orf30Q96GV9 206 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 TSSC4Q9Y5U2 329 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-214ENST00000530886 RP1P56715 2156 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 SPENQ96T58 3664 aaKnown RBP6.77□□□□□ -1.33
CSDE1-214ENST00000530886 ZNF816-ZNF321PA0A0X1KG74 233 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 H3BUT2 72 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 ZNF207O43670 478 aaKnown RBP6.77□□□□□ -1.33
CSDE1-214ENST00000530886 GNG4P50150 75 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 SLC25A53Q5H9E4 307 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 LINC01545Q5VT33 79 aa6.77□□□□□ -1.33
CSDE1-214ENST00000530886 ZNF331Q9NQX6 463 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-214ENST00000530886 C19orf25Q9UFG5 118 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-214ENST00000530886 DOCK11Q5JSL3 2073 aa6.76□□□□□ -1.33
CSDE1-214ENST00000530886 CST6Q15828 149 aa6.76□□□□□ -1.33
CSDE1-214ENST00000530886 KRTAP27-1Q3LI81 207 aa6.76□□□□□ -1.33
CSDE1-214ENST00000530886 ATP5L2Q7Z4Y8 100 aa6.76□□□□□ -1.33
CSDE1-214ENST00000530886 ZNF257Q9Y2Q1 563 aa6.76□□□□□ -1.33
CSDE1-214ENST00000530886 TRAV38-1A0A0B4J264 116 aa6.76□□□□□ -1.33
CSDE1-214ENST00000530886 M0R135 149 aa6.76□□□□□ -1.33
CSDE1-214ENST00000530886 SSBP2P81877 361 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-214ENST00000530886 FAM231DQ6ZW35 169 aa6.76□□□□□ -1.33
CSDE1-214ENST00000530886 TPRX1Q8N7U7 411 aa6.76□□□□□ -1.33
CSDE1-214ENST00000530886 NHLRC2Q8NBF2 726 aa6.76□□□□□ -1.33
CSDE1-214ENST00000530886 OR2T6Q8NHC8 308 aa6.76□□□□□ -1.33
CSDE1-214ENST00000530886 ZNF799Q96GE5 643 aa6.76□□□□□ -1.33
CSDE1-214ENST00000530886 SPANXB1Q9NS25 103 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-214ENST00000530886 TRIOO75962 3097 aa6.76□□□□□ -1.33
CSDE1-214ENST00000530886 RRHO14718 337 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 CRYGSP22914 178 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 GCHFRP30047 84 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 RPS21P63220 83 aaKnown RBP6.75□□□□□ -1.33
CSDE1-214ENST00000530886 KIR3DS1Q14943 382 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 LTC4SQ16873 150 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 ZNF841Q6ZN19 808 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 OR4A16Q8NH70 328 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 OR10G6Q8NH81 332 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 LMX1AQ8TE12 382 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 ZNF418Q8TF45 676 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-214ENST00000530886 SPTSSAQ969W0 71 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 WDR54Q9H977 334 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 RNF186Q9NXI6 227 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 FRYQ5TBA9 3013 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 IGHV1-24A0A0C4DH33 117 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 F8W1H4 67 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 H0Y8G0 127 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 SLC25A17O43808 307 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 IGLV2-8P01709 118 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 FABP2P12104 132 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 TMPRSS3P57727 454 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 PLCXD2Q0VAA5 305 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 CENPWQ5EE01 88 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 RNASEKQ6P5S7 137 aaKnown RBP6.75□□□□□ -1.33
CSDE1-214ENST00000530886 PRR22Q8IZ63 422 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 GCSAMQ8N6F7 178 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 OR9G4Q8NGQ1 327 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 OR51H1Q8NH63 302 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 BLNKQ8WV28 456 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 NABP1Q96AH0 204 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 CLDN23Q96B33 292 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 PERPQ96FX8 193 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 ZC2HC1AQ96GY0 325 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 GPR82Q96P67 336 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 COPS7AQ9UBW8 275 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 MANSC4A6NHS7 340 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-214ENST00000530886 VWC2LB2RUY7 222 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 LIPFP07098 398 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 ADH4P08319 380 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 MEF2CQ06413 473 aaPredicted RBP6.75□□□□□ -1.33
CSDE1-214ENST00000530886 ZNF788Q6ZQV5 615 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 LINC00596Q86U02 117 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 TMEM251Q8N6I4 163 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 IGF2BP2-AS1Q96M15 143 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 OXGR1Q96P68 337 aa6.75□□□□□ -1.33
CSDE1-214ENST00000530886 A0A1B0GX78 115 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 A0A1W2PP55 124 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 F5H5K5 113 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-214ENST00000530886 LEPROTL1O95214 131 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 HNRNPA1P09651 372 aaKnown RBP eCLIP6.74□□□□□ -1.33
CSDE1-214ENST00000530886 DEFA4P12838 97 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 DEFB103AP81534 67 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 ZXDAP98168 799 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 TIMM23BQ5SRD1 257 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 PRAMEF5Q5TYX0 476 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 PRAMEF6Q5VXH4 476 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 FGFRL1Q8N441 504 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 OR4X2Q8NGF9 303 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 PATE1Q8WXA2 126 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 TMEM54Q969K7 222 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 TRAPPC2LQ9UL33 140 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 PDE4DIPQ5VU43 2346 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 SPAARA0A1B0GVQ0 90 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 HELTA6NFD8 242 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 OTX2P32243 289 aa6.74□□□□□ -1.33
CSDE1-214ENST00000530886 SRSF6Q13247 344 aaKnown RBP6.74□□□□□ -1.33
CSDE1-214ENST00000530886 GDF5OSQ5U4N7 250 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms