RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 WNT9BO14905 357 aa13.09□□□□□ -0.31
PCDHA4-203ENST00000530339 RPL23P62829 140 aaKnown RBP13.09□□□□□ -0.31
PCDHA4-203ENST00000530339 SSBP3Q9BWW4 388 aaPredicted RBP13.09□□□□□ -0.31
PCDHA4-203ENST00000530339 RABAC1Q9UI14 185 aa13.09□□□□□ -0.31
PCDHA4-203ENST00000530339 RRHO14718 337 aa13.09□□□□□ -0.31
PCDHA4-203ENST00000530339 LIPFP07098 398 aa13.09□□□□□ -0.31
PCDHA4-203ENST00000530339 IL6RP08887 468 aaPredicted RBP13.09□□□□□ -0.31
PCDHA4-203ENST00000530339 TIMM23BQ5SRD1 257 aa13.09□□□□□ -0.31
PCDHA4-203ENST00000530339 DMRTA1Q5VZB9 504 aa13.09□□□□□ -0.31
PCDHA4-203ENST00000530339 RAB37Q96AX2 223 aa13.09□□□□□ -0.31
PCDHA4-203ENST00000530339 GLRXP35754 106 aa13.08□□□□□ -0.31
PCDHA4-203ENST00000530339 CYB5R2Q6BCY4 276 aa13.08□□□□□ -0.31
PCDHA4-203ENST00000530339 HEPN1Q6WQI6 88 aa13.08□□□□□ -0.31
PCDHA4-203ENST00000530339 SYT8Q8NBV8 401 aa13.08□□□□□ -0.31
PCDHA4-203ENST00000530339 TMEM170AQ8WVE7 144 aa13.08□□□□□ -0.31
PCDHA4-203ENST00000530339 GTF3AQ92664 365 aaKnown RBP13.08□□□□□ -0.31
PCDHA4-203ENST00000530339 J3KRW8 73 aa13.08□□□□□ -0.32
PCDHA4-203ENST00000530339 M0R3E3 92 aa13.08□□□□□ -0.32
PCDHA4-203ENST00000530339 HBBP68871 147 aa13.08□□□□□ -0.32
PCDHA4-203ENST00000530339 RSPO4Q2I0M5 234 aaPredicted RBP13.08□□□□□ -0.32
PCDHA4-203ENST00000530339 PAQR4Q8N4S7 273 aaPredicted RBP13.08□□□□□ -0.32
PCDHA4-203ENST00000530339 OSR1Q8TAX0 266 aaPredicted RBP13.08□□□□□ -0.32
PCDHA4-203ENST00000530339 SRSF12Q8WXF0 261 aaKnown RBP13.08□□□□□ -0.32
PCDHA4-203ENST00000530339 DOCK3Q8IZD9 2030 aa13.08□□□□□ -0.32
PCDHA4-203ENST00000530339 SPTA1P02549 2419 aa13.08□□□□□ -0.32
PCDHA4-203ENST00000530339 FAM89BQ8N5H3 189 aa13.08□□□□□ -0.32
PCDHA4-203ENST00000530339 CHODLQ9H9P2 273 aa13.08□□□□□ -0.32
PCDHA4-203ENST00000530339 CDCP2Q5VXM1 449 aa13.08□□□□□ -0.32
PCDHA4-203ENST00000530339 PEF1Q9UBV8 284 aaKnown RBP13.08□□□□□ -0.32
PCDHA4-203ENST00000530339 CCL1P22362 96 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 ERASQ7Z444 233 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 IMMP2LQ96T52 175 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 TIMP4Q99727 224 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 A0A0G2JMZ2 1700 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 LRRC37A2A6NM11 1700 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 B9A039 149 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 SLC17A3O00476 420 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 VKORC1L1Q8N0U8 176 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 ZNF502Q8TBZ5 544 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 MAP1LC3AQ9H492 121 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 C9orf172C9J069 976 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 GPX4P36969 197 aaPredicted RBP13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 NEU1Q99519 415 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 MIEN1Q9BRT3 115 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 TRBV6-7A0A0A0MS04 114 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 TFF3Q07654 80 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 CLEC7AQ9BXN2 247 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 WNT10AQ9GZT5 417 aa13.07□□□□□ -0.32
PCDHA4-203ENST00000530339 LOXL3P58215 753 aa13.06□□□□□ -0.32
PCDHA4-203ENST00000530339 JOSD1Q15040 202 aaPredicted RBP13.06□□□□□ -0.32
PCDHA4-203ENST00000530339 DNLZQ5SXM8 178 aa13.06□□□□□ -0.32
PCDHA4-203ENST00000530339 MRPL13Q9BYD1 178 aaKnown RBP13.06□□□□□ -0.32
PCDHA4-203ENST00000530339 C12orf77C9JDV5 145 aa13.06□□□□□ -0.32
PCDHA4-203ENST00000530339 SLC25A17O43808 307 aa13.06□□□□□ -0.32
PCDHA4-203ENST00000530339 ATP5G3P48201 142 aa13.06□□□□□ -0.32
PCDHA4-203ENST00000530339 EBLN2Q6P2I7 272 aa13.06□□□□□ -0.32
PCDHA4-203ENST00000530339 ACP7Q6ZNF0 438 aa13.06□□□□□ -0.32
PCDHA4-203ENST00000530339 TCF24Q7RTU0 167 aa13.06□□□□□ -0.32
PCDHA4-203ENST00000530339 OR1N2Q8NGR9 330 aa13.06□□□□□ -0.32
PCDHA4-203ENST00000530339 SMIM12Q96EX1 92 aa13.06□□□□□ -0.32
PCDHA4-203ENST00000530339 REPIN1Q9BWE0 567 aaKnown RBP13.06□□□□□ -0.32
PCDHA4-203ENST00000530339 ASXL3Q9C0F0 2248 aa13.06□□□□□ -0.32
PCDHA4-203ENST00000530339 LOC102723996A0A087X1L8 192 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 IGHV3-72A0A0B4J1Y9 119 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 FOXH1O75593 365 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 C14orf144Q96I85 54 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 IMMP1LQ96LU5 166 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 IGKV1-9A0A0C4DH69 117 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 LOC107984156A0A0G2JMH3 177 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 SCO2A0A1W2PP80 73 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 SS18L1O75177 396 aaPredicted RBP13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 PSMG4Q5JS54 123 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 ARL17AQ8IVW1 177 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 NPIPB3Q92617 1050 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 TDRD6O60522 2096 aaKnown RBP13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 PPIAL4CA0A0B4J2A2 164 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 PROB1E7EW31 1015 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 PPIAL4GP0DN37 164 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 MRPL14Q6P1L8 145 aaKnown RBP13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 CCL19Q99731 98 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 CYTL1Q9NRR1 136 aa13.05□□□□□ -0.32
PCDHA4-203ENST00000530339 CRIPAKQ8N1N5 446 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 TMEM190Q8WZ59 177 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 SGK494Q96LW2 274 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 CGAP01215 116 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 MEF2CQ06413 473 aaPredicted RBP13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 RTN4RQ9BZR6 473 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 FOXA3P55318 350 aaPredicted RBP13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 GFRA1P56159 465 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 ID3Q02535 119 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 C1QL4Q86Z23 238 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 HIST1H4GQ99525 98 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 SOX21Q9Y651 276 aaPredicted RBP13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 KIF26BQ2KJY2 2108 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 TIAF1O95411 115 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 LRTM2Q8N967 370 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 KCNS1Q96KK3 526 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 C16orf92Q96LL3 132 aa13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 RELQ04864 619 aaPredicted RBP13.04□□□□□ -0.32
PCDHA4-203ENST00000530339 C2orf83Q53S99 150 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms