RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 CT45A1Q5HYN5 189 aa16.03■□□□□ 0.16
PCF11-203ENST00000530304 FAM169BQ8N8A8 192 aa16.03■□□□□ 0.16
PCF11-203ENST00000530304 CT45A3Q8NHU0 189 aa16.03■□□□□ 0.16
PCF11-203ENST00000530304 ELOVL5Q9NYP7 299 aa16.03■□□□□ 0.16
PCF11-203ENST00000530304 A8MWP6 167 aa16.03■□□□□ 0.16
PCF11-203ENST00000530304 CGB3P0DN86 165 aa16.03■□□□□ 0.16
PCF11-203ENST00000530304 CGB7P0DN87 165 aa16.03■□□□□ 0.16
PCF11-203ENST00000530304 SELLP14151 372 aa16.03■□□□□ 0.16
PCF11-203ENST00000530304 WT1P19544 449 aaPredicted RBP16.03■□□□□ 0.16
PCF11-203ENST00000530304 HNF1AP20823 631 aa16.03■□□□□ 0.16
PCF11-203ENST00000530304 TEPPQ6URK8 271 aa16.03■□□□□ 0.16
PCF11-203ENST00000530304 OCC1Q8TAD7 63 aa16.03■□□□□ 0.16
PCF11-203ENST00000530304 SPRY3O43610 288 aa16.02■□□□□ 0.16
PCF11-203ENST00000530304 LHBP01229 141 aa16.02■□□□□ 0.16
PCF11-203ENST00000530304 RAB7AP51149 207 aa16.02■□□□□ 0.16
PCF11-203ENST00000530304 EFNB3Q15768 340 aa16.02■□□□□ 0.16
PCF11-203ENST00000530304 FAM201AQ5SY85 155 aa16.02■□□□□ 0.16
PCF11-203ENST00000530304 OR4A47Q6IF82 309 aa16.02■□□□□ 0.16
PCF11-203ENST00000530304 MRPL41Q8IXM3 137 aaKnown RBP16.02■□□□□ 0.16
PCF11-203ENST00000530304 GBGT1Q8N5D6 347 aa16.02■□□□□ 0.16
PCF11-203ENST00000530304 SAA2-SAA4A0A096LPE2 208 aa16.02■□□□□ 0.15
PCF11-203ENST00000530304 SAA2P0DJI9 122 aaPredicted RBP16.02■□□□□ 0.15
PCF11-203ENST00000530304 COL8A2P25067 703 aa16.02■□□□□ 0.15
PCF11-203ENST00000530304 SPATA31B1PQ5VZV4 182 aa16.02■□□□□ 0.15
PCF11-203ENST00000530304 SEM1Q6ZVN7 128 aa16.02■□□□□ 0.15
PCF11-203ENST00000530304 STPG3Q8N7X2 389 aa16.02■□□□□ 0.15
PCF11-203ENST00000530304 SLC24A4Q8NFF2 622 aa16.02■□□□□ 0.15
PCF11-203ENST00000530304 M0R1B8 84 aa16.01■□□□□ 0.15
PCF11-203ENST00000530304 NPY1RP25929 384 aa16.01■□□□□ 0.15
PCF11-203ENST00000530304 GCHFRP30047 84 aa16.01■□□□□ 0.15
PCF11-203ENST00000530304 CCKARP32238 428 aa16.01■□□□□ 0.15
PCF11-203ENST00000530304 WFIKKN1Q96NZ8 548 aa16.01■□□□□ 0.15
PCF11-203ENST00000530304 FOXH1O75593 365 aa16.01■□□□□ 0.15
PCF11-203ENST00000530304 TIMP3P35625 211 aa16.01■□□□□ 0.15
PCF11-203ENST00000530304 HSPE1P61604 102 aaKnown RBP16.01■□□□□ 0.15
PCF11-203ENST00000530304 VHLLQ6RSH7 139 aa16.01■□□□□ 0.15
PCF11-203ENST00000530304 NOL4LQ96MY1 436 aaPredicted RBP16.01■□□□□ 0.15
PCF11-203ENST00000530304 TMEM14BQ9NUH8 114 aa16.01■□□□□ 0.15
PCF11-203ENST00000530304 FOXA2Q9Y261 457 aaPredicted RBP16.01■□□□□ 0.15
PCF11-203ENST00000530304 A0A1B0GV90 55 aa16■□□□□ 0.15
PCF11-203ENST00000530304 ITGB1BP1O14713 200 aa16■□□□□ 0.15
PCF11-203ENST00000530304 TEX38Q6PEX7 206 aa16■□□□□ 0.15
PCF11-203ENST00000530304 TCF23Q7RTU1 214 aa16■□□□□ 0.15
PCF11-203ENST00000530304 ITLN1Q8WWA0 313 aa16■□□□□ 0.15
PCF11-203ENST00000530304 CA2P00918 260 aa16■□□□□ 0.15
PCF11-203ENST00000530304 RHOBP62745 196 aa16■□□□□ 0.15
PCF11-203ENST00000530304 RPL31P62899 125 aaKnown RBP16■□□□□ 0.15
PCF11-203ENST00000530304 OR10G8Q8NGN5 311 aa16■□□□□ 0.15
PCF11-203ENST00000530304 KBTBD11-OT1A0A1B0GTJ5 212 aa15.99■□□□□ 0.15
PCF11-203ENST00000530304 MYOD1P15172 320 aa15.99■□□□□ 0.15
PCF11-203ENST00000530304 KLF3P57682 345 aaPredicted RBP15.99■□□□□ 0.15
PCF11-203ENST00000530304 TMEM256Q8N2U0 113 aa15.99■□□□□ 0.15
PCF11-203ENST00000530304 ENY2Q9NPA8 101 aa15.99■□□□□ 0.15
PCF11-203ENST00000530304 BDP1A6H8Y1 2624 aa15.99■□□□□ 0.15
PCF11-203ENST00000530304 A0A1B0GUS0 222 aa15.99■□□□□ 0.15
PCF11-203ENST00000530304 RPL29P47914 159 aaKnown RBP15.99■□□□□ 0.15
PCF11-203ENST00000530304 THBS3P49746 956 aa15.99■□□□□ 0.15
PCF11-203ENST00000530304 DUX4L9Q6RFH8 374 aaPredicted RBP15.99■□□□□ 0.15
PCF11-203ENST00000530304 LYG1Q8N1E2 194 aa15.99■□□□□ 0.15
PCF11-203ENST00000530304 DSCAMO60469 2012 aa15.99■□□□□ 0.15
PCF11-203ENST00000530304 RAB31Q13636 194 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 IDI2-AS1Q9NZ38 188 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 CADP27708 2225 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 K7EN84 100 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 IGFBP2P18065 325 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 GLRXP35754 106 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 MRPS11P82912 194 aaKnown RBP15.98■□□□□ 0.15
PCF11-203ENST00000530304 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.98■□□□□ 0.15
PCF11-203ENST00000530304 OR4P4Q8NGL7 312 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 HINT2Q9BX68 163 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 NCOR1P1Q9H4R4 102 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 CHODLQ9H9P2 273 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 MBD3L4A6NDZ8 208 aaPredicted RBP15.98■□□□□ 0.15
PCF11-203ENST00000530304 MBD3L3A6NE82 208 aaPredicted RBP15.98■□□□□ 0.15
PCF11-203ENST00000530304 MBD3L5A6NJ08 208 aaPredicted RBP15.98■□□□□ 0.15
PCF11-203ENST00000530304 NUPR1O60356 82 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 OR4A8P0C604 315 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 ADMP35318 185 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 YPEL3P61236 119 aaPredicted RBP15.98■□□□□ 0.15
PCF11-203ENST00000530304 SSX2Q16385 188 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 MBD3L2Q8NHZ7 208 aaPredicted RBP15.98■□□□□ 0.15
PCF11-203ENST00000530304 ASCL3Q9NQ33 180 aa15.98■□□□□ 0.15
PCF11-203ENST00000530304 SVILO95425 2214 aa15.97■□□□□ 0.15
PCF11-203ENST00000530304 IQCJQ1A5X6 159 aa15.97■□□□□ 0.15
PCF11-203ENST00000530304 HLA-DRB5Q30154 266 aa15.97■□□□□ 0.15
PCF11-203ENST00000530304 MT-CO2P00403 227 aa15.97■□□□□ 0.15
PCF11-203ENST00000530304 PRR20EP86478 221 aa15.97■□□□□ 0.15
PCF11-203ENST00000530304 PRR20CP86479 221 aa15.97■□□□□ 0.15
PCF11-203ENST00000530304 PRR20DP86480 221 aa15.97■□□□□ 0.15
PCF11-203ENST00000530304 PRR20BP86481 221 aa15.97■□□□□ 0.15
PCF11-203ENST00000530304 PRR20AP86496 221 aa15.97■□□□□ 0.15
PCF11-203ENST00000530304 TIMM23BQ5SRD1 257 aa15.97■□□□□ 0.15
PCF11-203ENST00000530304 ZNF474Q6S9Z5 364 aaPredicted RBP15.97■□□□□ 0.15
PCF11-203ENST00000530304 RAB9BQ9NP90 201 aa15.97■□□□□ 0.15
PCF11-203ENST00000530304 OR51B2Q9Y5P1 312 aa15.97■□□□□ 0.15
PCF11-203ENST00000530304 DSCAML1Q8TD84 2053 aa15.96■□□□□ 0.15
PCF11-203ENST00000530304 TRGV10A0A0A0MS01 117 aa15.96■□□□□ 0.15
PCF11-203ENST00000530304 DEFB109BQ30KR1 87 aa15.96■□□□□ 0.15
PCF11-203ENST00000530304 NEUROG1Q92886 237 aa15.96■□□□□ 0.15
PCF11-203ENST00000530304 NDUFAF3Q9BU61 184 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms