RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 CD24P25063 80 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 VMA21Q3ZAQ7 101 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 NPCDR1Q9BY65 106 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 NPVFQ9HCQ7 196 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 SIRT7Q9NRC8 400 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 TRAV3A0A0B4J244 114 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 CDX4O14627 284 aaPredicted RBP10.35□□□□□ -0.75
SCN3B-206ENST00000530277 CBLN1P23435 193 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 GNB2P62879 340 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 OR5I1Q13606 314 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 P2RY6Q15077 328 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 TMEM42Q69YG0 159 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 VN1R17PQ8TDU5 208 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 GAL3ST2Q9H3Q3 398 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 PARD6AQ9NPB6 346 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 FAM87AP0C7U9 286 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 DLX1P56177 255 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 CTAG1AP78358 180 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 KRTCAP3Q53RY4 240 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 PQLC2Q6ZP29 291 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 SSX7Q7RTT5 188 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 TCF23Q7RTU1 214 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 OR2D3Q8NGH3 330 aa10.35□□□□□ -0.75
SCN3B-206ENST00000530277 GPX4P36969 197 aaPredicted RBP10.34□□□□□ -0.75
SCN3B-206ENST00000530277 LINC01560Q8TB33 94 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 SNRNP40Q96DI7 357 aaKnown RBP10.34□□□□□ -0.75
SCN3B-206ENST00000530277 MS4A5Q9H3V2 200 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 SLC45A2Q9UMX9 530 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 INSIG2Q9Y5U4 225 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 CHEK1O14757 476 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 MOSP00540 346 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 CD33P20138 364 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 HOXA6P31267 233 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 PAX5Q02548 391 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 NMSQ5H8A3 153 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 RPP25LQ8N5L8 163 aaKnown RBP10.34□□□□□ -0.75
SCN3B-206ENST00000530277 MANBALQ9NQG1 85 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 USP9YO00507 2555 aaPredicted RBP10.34□□□□□ -0.75
SCN3B-206ENST00000530277 PPIAL4EA0A075B759 164 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 PPIAL4DF5H284 164 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 CA2P00918 260 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 CGAP01215 116 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 C1QTNF9P0C862 333 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 LINC00869P0C866 280 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 PPIAL4FP0DN26 164 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 IGFBP2P18065 325 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 SPCS3P61009 180 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 LRRC75BQ2VPJ9 315 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 DERL1Q9BUN8 251 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 ZNF586Q9NXT0 402 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 PPIAL4AQ9Y536 164 aa10.34□□□□□ -0.75
SCN3B-206ENST00000530277 AHRRA9YTQ3 701 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 J3KRW8 73 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 OR9G9P0C7N8 305 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 C10orf55Q5SWW7 151 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 ZNF497Q6ZNH5 498 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 OR1L6Q8NGR2 347 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 DCAF16Q9NXF7 216 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 ARL2-SNX15V9GYD0 113 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 SCO2A0A1W2PP80 73 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 LINC00473A8K010 186 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 MLNRO43193 412 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 ARL3P36405 182 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 KIR2DL2P43627 348 aaPredicted RBP10.33□□□□□ -0.76
SCN3B-206ENST00000530277 ZNF506Q5JVG8 444 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 ZBTB34Q8NCN2 500 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 LSM10Q969L4 123 aaKnown RBP10.33□□□□□ -0.76
SCN3B-206ENST00000530277 FREM2Q5SZK8 3169 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 IGKV3D-15A0A087WSY6 115 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 RND2P52198 227 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 BPIFB3P59826 476 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 PRR7Q8TB68 274 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 FAM222BQ8WU58 562 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 COL6A3P12111 3177 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 PAX6P26367 422 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 PYY3Q5JQD4 70 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 C1orf185Q5T7R7 199 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 ATOH7Q8N100 152 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 STPG3Q8N7X2 389 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 OR5AU1Q8NGC0 362 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 NPIPB3Q92617 1050 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 ABHD17AQ96GS6 310 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 RNF24Q9Y225 148 aa10.33□□□□□ -0.76
SCN3B-206ENST00000530277 TCF21O43680 179 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 MFAP2P55001 183 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 MMDQ15546 238 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 ZFYVE26Q68DK2 2539 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 IGHV1-18A0A0C4DH31 117 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 ETV2O00321 342 aaPredicted RBP10.32□□□□□ -0.76
SCN3B-206ENST00000530277 AGAP20933 346 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 PCSK4Q6UW60 755 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 TIMD4Q96H15 378 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 ZNF729A6NN14 1252 aaPredicted RBP10.32□□□□□ -0.76
SCN3B-206ENST00000530277 HSBP1L1C9JCN9 74 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 CXorf1O96002 111 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 ARF6P62330 175 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 MLANAQ16655 118 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 SLC35E4Q6ICL7 350 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 LYPD6Q86Y78 171 aa10.32□□□□□ -0.76
SCN3B-206ENST00000530277 MRPL37Q9BZE1 423 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms