RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PYDC2Q56P42 97 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 KPRPQ5T749 579 aaPredicted RBP9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 TTC9CQ8N5M4 171 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 OR1N2Q8NGR9 330 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 ZFAND1Q8TCF1 268 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 MARCH1Q8TCQ1 289 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 MRGPRFQ96AM1 343 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 RCC1LQ96I51 464 aaKnown RBP9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 COA4Q9NYJ1 87 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 NOTCH1P46531 2555 aa9.82□□□□□ -0.84
CCDC90B-216ENST00000529856 A0A0G2JLM5 398 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 A0A1B0GW64 132 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 HMX3A6NHT5 357 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 MARCH11A6NNE9 402 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 DUS4LO95620 317 aaKnown RBP9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 KRASP01116 189 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 CTSDP07339 412 aaPredicted RBP9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 LGALS1P09382 135 aaKnown RBP9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 MYOD1P15172 320 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 G6PCP35575 357 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 ETV6P41212 452 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 ECI1P42126 302 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 ZNF79Q15937 498 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 SLC25A42Q86VD7 318 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 Q8N402 240 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 OR51S1Q8NGJ8 323 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 OR6Q1Q8NGQ2 317 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 OR13C8Q8NGS7 320 aa9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 FYTTD1Q96QD9 318 aaKnown RBP9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 ALX4Q9H161 411 aaPredicted RBP9.81□□□□□ -0.84
CCDC90B-216ENST00000529856 C13orf42A0A1B0GVH6 325 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 CGB1A6NKQ9 187 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 IGKV1-39P01597 117 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 IGHV3-11P01762 117 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 IGKV1D-39P04432 117 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 RAB25P57735 213 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 OR2B8PP59922 312 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 ZNF616Q08AN1 781 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 SURF2Q15527 256 aaPredicted RBP9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 SPANXN2Q5MJ10 180 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 DPF1Q92782 380 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 TRIM63Q969Q1 353 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 PRRT1Q99946 306 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 RTBDNQ9BSG5 229 aaPredicted RBP9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 MCRIP2Q9BUT9 160 aaKnown RBP9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 COMMD5Q9GZQ3 224 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 SLC2A8Q9NY64 477 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 COPZ2Q9P299 210 aa9.8□□□□□ -0.84
CCDC90B-216ENST00000529856 TRBV9A0A0B4J1U6 114 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 C3orf85A0A1B0GTC6 90 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 NPIPB5A8MRT5 1133 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 H0Y980 276 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 RBMXL2O75526 392 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 SNAPC5O75971 98 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 PRH1P02810 166 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 HSPB1P04792 205 aaKnown RBP9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 SERPINE2P07093 398 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 CRYGCP07315 174 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 OR8U8P0C7N1 319 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 AREGP15514 252 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 ZNF45Q02386 682 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 KLF9Q13886 244 aaPredicted RBP9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 CCDC71LQ8N9Z2 235 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 SEC22AQ96IW7 307 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 USMG5Q96IX5 58 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 TP53RKQ96S44 253 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 SCP2D1Q9UJQ7 156 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 GPR132Q9UNW8 380 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 ZNF257Q9Y2Q1 563 aa9.79□□□□□ -0.84
CCDC90B-216ENST00000529856 IGHV4OR15-8A0A075B7B6 117 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 A0A087WW49 117 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 TEX50A0A1B0GTY4 177 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 LINC01619G3V211 115 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 CTRB1P17538 263 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 PSMB6P28072 239 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 AP3S2P59780 193 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 KLK9Q2XQG4 91 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 CTRB2Q6GPI1 263 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 TOMM5Q8N4H5 51 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 GDPD1Q8N9F7 314 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 TSC22D3Q99576 134 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 SRSF8Q9BRL6 282 aaKnown RBP9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 GPR61Q9BZJ8 451 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 SRRQ9GZT4 340 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 C5orf66Q9H5L9 145 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 AKIP1Q9NQ31 210 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 MCUBQ9NWR8 336 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 KLK9Q9UKQ9 250 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 C14orf166Q9Y224 244 aaKnown RBP9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 NSG2Q9Y328 171 aa9.78□□□□□ -0.84
CCDC90B-216ENST00000529856 IGLC7A0M8Q6 106 aa9.77□□□□□ -0.85
CCDC90B-216ENST00000529856 FAM223BA6NKX1 122 aa9.77□□□□□ -0.85
CCDC90B-216ENST00000529856 B3GALNT1O75752 331 aa9.77□□□□□ -0.85
CCDC90B-216ENST00000529856 TRAPPC2P0DI81 140 aa9.77□□□□□ -0.85
CCDC90B-216ENST00000529856 TRAPPC2BP0DI82 140 aa9.77□□□□□ -0.85
CCDC90B-216ENST00000529856 FAUP35544 74 aaKnown RBP9.77□□□□□ -0.85
CCDC90B-216ENST00000529856 RHOGP84095 191 aa9.77□□□□□ -0.85
CCDC90B-216ENST00000529856 DEFA5Q01523 94 aa9.77□□□□□ -0.85
CCDC90B-216ENST00000529856 ATP5G2Q06055 141 aa9.77□□□□□ -0.85
CCDC90B-216ENST00000529856 SP6Q3SY56 376 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms