RNA–Protein interactions for RNA: ENST00000528942.1

CCDC18-210, Transcript of coiled-coil domain containing 18, humanhuman

TSL 4

Gene CCDC18, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-210ENST00000528942 FAM223BA6NKX1 122 aa11.52□□□□□ -0.57
CCDC18-210ENST00000528942 NPIPB5A8MRT5 1133 aa11.52□□□□□ -0.57
CCDC18-210ENST00000528942 KRASP01116 189 aa11.52□□□□□ -0.57
CCDC18-210ENST00000528942 PRB2P02812 416 aaPredicted RBP11.52□□□□□ -0.57
CCDC18-210ENST00000528942 IL6RP08887 468 aaPredicted RBP11.52□□□□□ -0.57
CCDC18-210ENST00000528942 AKAIN1P0CW23 69 aa11.52□□□□□ -0.57
CCDC18-210ENST00000528942 S100A5P33763 92 aa11.52□□□□□ -0.57
CCDC18-210ENST00000528942 ECI1P42126 302 aa11.52□□□□□ -0.57
CCDC18-210ENST00000528942 LPAR6P43657 344 aa11.52□□□□□ -0.57
CCDC18-210ENST00000528942 RND3P61587 244 aa11.52□□□□□ -0.57
CCDC18-210ENST00000528942 FAAP20Q6NZ36 180 aa11.52□□□□□ -0.57
CCDC18-210ENST00000528942 FAM223AQ8IWN6 122 aa11.52□□□□□ -0.57
CCDC18-210ENST00000528942 TTC9CQ8N5M4 171 aa11.52□□□□□ -0.57
CCDC18-210ENST00000528942 TERB2Q8NHR7 220 aa11.52□□□□□ -0.57
CCDC18-210ENST00000528942 USMG5Q96IX5 58 aa11.52□□□□□ -0.57
CCDC18-210ENST00000528942 COMMD5Q9GZQ3 224 aa11.52□□□□□ -0.57
CCDC18-210ENST00000528942 HMX3A6NHT5 357 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 SEC14L6B5MCN3 397 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 DISC1C4P0D8 188 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 UPK2O00526 184 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 DHFRP00374 187 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 HSPB1P04792 205 aaKnown RBP11.51□□□□□ -0.57
CCDC18-210ENST00000528942 RPA2P15927 270 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 PI3P19957 117 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 HOXD3P31249 432 aaPredicted RBP11.51□□□□□ -0.57
CCDC18-210ENST00000528942 G6PCP35575 357 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 PIGPP57054 158 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 OR2B8PP59922 312 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 RHOGP84095 191 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 DEFA5Q01523 94 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 EGFEM1PQ0D2K5 195 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 ZNF585BQ52M93 769 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 C9orf66Q5T8R8 295 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 CADM3Q8N126 398 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 NECAP1Q8NC96 275 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 OR13C8Q8NGS7 320 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 ZFAND1Q8TCF1 268 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 SOSTQ9BQB4 213 aa11.51□□□□□ -0.57
CCDC18-210ENST00000528942 AURKAIP1Q9NWT8 199 aaPredicted RBP11.51□□□□□ -0.57
CCDC18-210ENST00000528942 TRBV9A0A0B4J1U6 114 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 TRAV3A0A0B4J244 114 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 A0A1B0GW64 132 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 ANKRD20A5PA0PJZ0 165 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 E7EUB6 86 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 H0Y980 276 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 PRH1P02810 166 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 SERPINE2P07093 398 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 MYOD1P15172 320 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 AREGP15514 252 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 PTBP1P26599 531 aaKnown RBP eCLIP11.5□□□□□ -0.574e-7■■■□□ 16.2
CCDC18-210ENST00000528942 SLURP1P55000 103 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 ZNF45Q02386 682 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 THOC7Q6I9Y2 204 aaKnown RBP11.5□□□□□ -0.57
CCDC18-210ENST00000528942 CCDC71LQ8N9Z2 235 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 OR4C16Q8NGL9 310 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 PRRT1Q99946 306 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 SRSF8Q9BRL6 282 aaKnown RBP11.5□□□□□ -0.57
CCDC18-210ENST00000528942 QTRT1Q9BXR0 403 aaKnown RBP11.5□□□□□ -0.57
CCDC18-210ENST00000528942 RANGRFQ9HD47 186 aaPredicted RBP11.5□□□□□ -0.57
CCDC18-210ENST00000528942 AKIP1Q9NQ31 210 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 COPZ2Q9P299 210 aa11.5□□□□□ -0.57
CCDC18-210ENST00000528942 ZMAT5Q9UDW3 170 aaKnown RBP11.5□□□□□ -0.57
CCDC18-210ENST00000528942 OVOL1O14753 267 aa11.49□□□□□ -0.57
CCDC18-210ENST00000528942 RBMXL2O75526 392 aaKnown RBP11.49□□□□□ -0.57
CCDC18-210ENST00000528942 SNAPC5O75971 98 aa11.49□□□□□ -0.57
CCDC18-210ENST00000528942 ZP3P21754 424 aa11.49□□□□□ -0.57
CCDC18-210ENST00000528942 PSMB6P28072 239 aa11.49□□□□□ -0.57
CCDC18-210ENST00000528942 EXOSC2Q13868 293 aaKnown RBP11.49□□□□□ -0.57
CCDC18-210ENST00000528942 SURF2Q15527 256 aaPredicted RBP11.49□□□□□ -0.57
CCDC18-210ENST00000528942 ZNF343Q6P1L6 599 aa11.49□□□□□ -0.57
CCDC18-210ENST00000528942 MARCH1Q8TCQ1 289 aa11.49□□□□□ -0.57
CCDC18-210ENST00000528942 DCUN1D4Q92564 292 aa11.49□□□□□ -0.57
CCDC18-210ENST00000528942 TSC22D3Q99576 134 aa11.49□□□□□ -0.57
CCDC18-210ENST00000528942 PRNDQ9UKY0 176 aa11.49□□□□□ -0.57
CCDC18-210ENST00000528942 C14orf166Q9Y224 244 aaKnown RBP11.49□□□□□ -0.57
CCDC18-210ENST00000528942 V9GYH0 126 aa11.49□□□□□ -0.57
CCDC18-210ENST00000528942 IGLC7A0M8Q6 106 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 ANKRD34BA5PLL1 514 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 CGB1A6NKQ9 187 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 REG1AP05451 166 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 CRYGCP07315 174 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 CTSDP07339 412 aaPredicted RBP11.48□□□□□ -0.57
CCDC18-210ENST00000528942 DEFA4P12838 97 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 INSL3P51460 131 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 KRTAP10-11P60412 298 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 ATP5G2Q06055 141 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 C15orf32Q32M92 178 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 PYDC2Q56P42 97 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 SPANXN2Q5MJ10 180 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 C19orf35Q6ZS72 473 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 HSD17B13Q7Z5P4 300 aaPredicted RBP11.48□□□□□ -0.57
CCDC18-210ENST00000528942 DLX4Q92988 240 aaPredicted RBP11.48□□□□□ -0.57
CCDC18-210ENST00000528942 MRGPRFQ96AM1 343 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 SLC2A8Q9NY64 477 aa11.48□□□□□ -0.57
CCDC18-210ENST00000528942 C3orf85A0A1B0GTC6 90 aa11.47□□□□□ -0.57
CCDC18-210ENST00000528942 C15orf61A6NNL5 157 aa11.47□□□□□ -0.57
CCDC18-210ENST00000528942 B3GALNT1O75752 331 aa11.47□□□□□ -0.57
CCDC18-210ENST00000528942 IGKV1-39P01597 117 aa11.47□□□□□ -0.57
CCDC18-210ENST00000528942 IGKV1D-39P04432 117 aa11.47□□□□□ -0.57
CCDC18-210ENST00000528942 CTRB1P17538 263 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms