RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 OR56A5P0C7T3 313 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 OGNP20774 298 aaKnown RBP3.91□□□□□ -1.78
PCF11-202ENST00000528336 CA5AP35218 305 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 NUDT1P36639 197 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 EIF1P41567 113 aaKnown RBP3.91□□□□□ -1.78
PCF11-202ENST00000528336 GNB2P62879 340 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 PRDX4Q13162 271 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 NSDHLQ15738 373 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 ATP6AP1LQ52LC2 224 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 MESTQ5EB52 335 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 C4orf22Q6V702 233 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 ZNF493Q6ZR52 646 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 Q6ZRU5 148 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 LRRC28Q86X40 367 aaPredicted RBP3.91□□□□□ -1.78
PCF11-202ENST00000528336 TMEM252Q8N6L7 170 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 ST6GALNAC3Q8NDV1 305 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 LHFPL5Q8TAF8 219 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 RXFP4Q8TDU9 374 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 NUP205Q92621 2012 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 MAGOHBQ96A72 148 aaKnown RBP3.91□□□□□ -1.78
PCF11-202ENST00000528336 OR4K3Q96R72 315 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 TRIB3Q96RU7 358 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 ZNF649Q9BS31 505 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 RNASE7Q9H1E1 156 aaKnown RBP3.91□□□□□ -1.78
PCF11-202ENST00000528336 FAM96AQ9H5X1 160 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 RBM12B-AS1Q9P1G2 102 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 NYNRINQ9P2P1 1898 aaKnown RBP3.91□□□□□ -1.78
PCF11-202ENST00000528336 PKIGQ9Y2B9 76 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 ASB4Q9Y574 426 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 VPS13AQ96RL7 3174 aa3.91□□□□□ -1.78
PCF11-202ENST00000528336 PIEZO1Q92508 2521 aa3.9□□□□□ -1.78
PCF11-202ENST00000528336 ATG2BQ96BY7 2078 aa3.9□□□□□ -1.78
PCF11-202ENST00000528336 ZFHX2Q9C0A1 2572 aaPredicted RBP3.9□□□□□ -1.78
PCF11-202ENST00000528336 IGKV1-27A0A075B6S5 117 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 TRAV8-3A0A0A6YYJ7 113 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 FAM236DA0A1B0GTK5 79 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 LOC285095A0A1B0GVY8 99 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 hADV38S2A0JD32 116 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 C5orf49A4QMS7 147 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 H3BP45 60 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 COPEO14579 308 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 CCDC22O60826 627 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 IGLV1-47P01700 117 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 IGHV4-34P06331 123 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 BPGMP07738 259 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 CHTF8P0CG12 524 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 FAM236CP0DP71 79 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 APLNRP35414 380 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 WNT4P56705 351 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 CDK5Q00535 292 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 FABP5Q01469 135 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 CENPWQ5EE01 88 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 COA6Q5JTJ3 125 aaKnown RBP3.9□□□□□ -1.79
PCF11-202ENST00000528336 AKR1C8PQ5T2L2 129 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 C1orf194Q5T5A4 169 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 SAMD13Q5VXD3 122 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 LCN8Q6JVE9 175 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 GOLT1AQ6ZVE7 132 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 TMEM61Q8N0U2 210 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 OR8S1Q8NH09 359 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 OR5J2Q8NH18 312 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 OR5K1Q8NHB7 308 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 FAM104AQ969W3 186 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 CAPZA3Q96KX2 299 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 LYSMD1Q96S90 227 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 GPER1Q99527 375 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 EBF4Q9BQW3 602 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 ULBP3Q9BZM4 244 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 LYRM2Q9NU23 88 aaPredicted RBP3.9□□□□□ -1.79
PCF11-202ENST00000528336 C14orf105Q9NVL8 296 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 RSL24D1Q9UHA3 163 aaKnown RBP3.9□□□□□ -1.79
PCF11-202ENST00000528336 OTOGLQ3ZCN5 2332 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 EP300Q09472 2414 aaPredicted RBP3.9□□□□□ -1.79
PCF11-202ENST00000528336 GVINP1Q7Z2Y8 2422 aa3.9□□□□□ -1.79
PCF11-202ENST00000528336 RIF1Q5UIP0 2472 aaKnown RBP3.89□□□□□ -1.79
PCF11-202ENST00000528336 WDR87Q6ZQQ6 2873 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 LOC389332A0A1B0GUA5 103 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 OR5H1A6NKK0 313 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 TMEM250H0YL14 139 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 PEX7O00628 323 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 OR2J2O76002 312 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 PDYNP01213 254 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 CRYBA1P05813 215 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 FGF6P10767 208 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 ZNF30P17039 623 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 CDK2P24941 298 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 RPL22P35268 128 aaKnown RBP3.89□□□□□ -1.79
PCF11-202ENST00000528336 POLR2IP36954 125 aaKnown RBP3.89□□□□□ -1.79
PCF11-202ENST00000528336 MAP2K4P45985 399 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 TDGF1P3P51864 188 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 HLA-DRB3P79483 266 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 IFITM3Q01628 133 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 PSG7Q13046 419 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 WHAMMP3Q1A5X7 153 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 HENMT1Q5T8I9 393 aaKnown RBP3.89□□□□□ -1.79
PCF11-202ENST00000528336 FAM222AQ5U5X8 452 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 GLYATQ6IB77 296 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 C20orf196Q8IYI0 205 aa3.89□□□□□ -1.79
PCF11-202ENST00000528336 OR2T4Q8NH00 348 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms