RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 ERVK-16P61578 105 aa20.24■□□□□ 0.83
TSPAN4-217ENST00000527644 ATP5G2Q06055 141 aa20.24■□□□□ 0.83
TSPAN4-217ENST00000527644 LAX1Q8IWV1 398 aa20.24■□□□□ 0.83
TSPAN4-217ENST00000527644 SLC38A6Q8IZM9 456 aa20.24■□□□□ 0.83
TSPAN4-217ENST00000527644 CRYGCP07315 174 aa20.23■□□□□ 0.83
TSPAN4-217ENST00000527644 TBPP20226 339 aa20.23■□□□□ 0.83
TSPAN4-217ENST00000527644 LPAR6P43657 344 aa20.23■□□□□ 0.83
TSPAN4-217ENST00000527644 PHLDA2Q53GA4 152 aa20.23■□□□□ 0.83
TSPAN4-217ENST00000527644 RNASE10Q5GAN6 216 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-217ENST00000527644 ELOVL1Q9BW60 279 aa20.23■□□□□ 0.83
TSPAN4-217ENST00000527644 ZNF256Q9Y2P7 627 aaPredicted RBP20.23■□□□□ 0.83
TSPAN4-217ENST00000527644 TRAV3A0A0B4J244 114 aa20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 MARCH11A6NNE9 402 aa20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 DHFRP00374 187 aa20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 CD3DP04234 171 aa20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 MYOD1P15172 320 aa20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 AREGP15514 252 aa20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 PSMB6P28072 239 aa20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 OR2B8PP59922 312 aa20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 MRPS10P82664 201 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 KLF5Q13887 457 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 ZNF585BQ52M93 769 aa20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 CADM3Q8N126 398 aa20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 OR4C12Q96R67 309 aa20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 PRR25Q96S07 402 aa20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 COMMD5Q9GZQ3 224 aa20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 FAM212BQ9NTI7 297 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-217ENST00000527644 GABARAPH6UMI1 98 aa20.21■□□□□ 0.83
TSPAN4-217ENST00000527644 OR2J3O76001 311 aa20.21■□□□□ 0.83
TSPAN4-217ENST00000527644 TRBV12-3P01733 135 aa20.21■□□□□ 0.83
TSPAN4-217ENST00000527644 EXOSC2Q13868 293 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-217ENST00000527644 ARRDC1Q8N5I2 433 aa20.21■□□□□ 0.83
TSPAN4-217ENST00000527644 RABL2AQ9UBK7 228 aaPredicted RBP20.21■□□□□ 0.83
TSPAN4-217ENST00000527644 RABL2BQ9UNT1 228 aa20.21■□□□□ 0.83
TSPAN4-217ENST00000527644 CGB1A6NKQ9 187 aa20.2■□□□□ 0.82
TSPAN4-217ENST00000527644 H3BMQ9 156 aa20.2■□□□□ 0.82
TSPAN4-217ENST00000527644 RPA2P15927 270 aa20.2■□□□□ 0.82
TSPAN4-217ENST00000527644 CTRB1P17538 263 aa20.2■□□□□ 0.82
TSPAN4-217ENST00000527644 SSBP1Q04837 148 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-217ENST00000527644 C15orf32Q32M92 178 aa20.2■□□□□ 0.82
TSPAN4-217ENST00000527644 FAM209BQ5JX69 171 aa20.2■□□□□ 0.82
TSPAN4-217ENST00000527644 CTRB2Q6GPI1 263 aa20.2■□□□□ 0.82
TSPAN4-217ENST00000527644 TBC1D26Q86UD7 250 aa20.2■□□□□ 0.82
TSPAN4-217ENST00000527644 TMEM229BQ8NBD8 167 aa20.2■□□□□ 0.82
TSPAN4-217ENST00000527644 OR6Q1Q8NGQ2 317 aa20.2■□□□□ 0.82
TSPAN4-217ENST00000527644 ISOC1Q96CN7 298 aa20.2■□□□□ 0.82
TSPAN4-217ENST00000527644 SRSF8Q9BRL6 282 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-217ENST00000527644 SORL1Q92673 2214 aa20.2■□□□□ 0.82
TSPAN4-217ENST00000527644 KRASP01116 189 aa20.19■□□□□ 0.82
TSPAN4-217ENST00000527644 TAS2R19P59542 299 aa20.19■□□□□ 0.82
TSPAN4-217ENST00000527644 TATDN3Q17R31 274 aa20.19■□□□□ 0.82
TSPAN4-217ENST00000527644 RPEL1Q2QD12 228 aa20.19■□□□□ 0.82
TSPAN4-217ENST00000527644 KLK9Q2XQG4 91 aa20.19■□□□□ 0.82
TSPAN4-217ENST00000527644 LHFPL1Q86WI0 220 aa20.19■□□□□ 0.82
TSPAN4-217ENST00000527644 DIRAS2Q96HU8 199 aa20.19■□□□□ 0.82
TSPAN4-217ENST00000527644 FANCD2OSQ96PS1 177 aa20.19■□□□□ 0.82
TSPAN4-217ENST00000527644 FBXL7Q9UJT9 491 aa20.19■□□□□ 0.82
TSPAN4-217ENST00000527644 KLK9Q9UKQ9 250 aa20.19■□□□□ 0.82
TSPAN4-217ENST00000527644 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-217ENST00000527644 CD74P04233 296 aa20.18■□□□□ 0.82
TSPAN4-217ENST00000527644 HIST1H1BP16401 226 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-217ENST00000527644 THOC7Q6I9Y2 204 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-217ENST00000527644 C19orf35Q6ZS72 473 aa20.18■□□□□ 0.82
TSPAN4-217ENST00000527644 ZNF486Q96H40 463 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-217ENST00000527644 QTRT1Q9BXR0 403 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-217ENST00000527644 LSM4Q9Y4Z0 139 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-217ENST00000527644 LY86O95711 162 aa20.17■□□□□ 0.82
TSPAN4-217ENST00000527644 DEFA4P12838 97 aa20.17■□□□□ 0.82
TSPAN4-217ENST00000527644 G6PCP35575 357 aa20.17■□□□□ 0.82
TSPAN4-217ENST00000527644 SYNJ2BPP57105 145 aa20.17■□□□□ 0.82
TSPAN4-217ENST00000527644 OR9G4Q8NGQ1 327 aa20.17■□□□□ 0.82
TSPAN4-217ENST00000527644 SLIRPQ9GZT3 109 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-217ENST00000527644 C6orf62Q9GZU0 229 aaPredicted RBP20.17■□□□□ 0.82
TSPAN4-217ENST00000527644 IGLC7A0M8Q6 106 aa20.16■□□□□ 0.82
TSPAN4-217ENST00000527644 CTDSPLO15194 276 aa20.16■□□□□ 0.82
TSPAN4-217ENST00000527644 SNAPC5O75971 98 aa20.16■□□□□ 0.82
TSPAN4-217ENST00000527644 RAB3DO95716 219 aa20.16■□□□□ 0.82
TSPAN4-217ENST00000527644 REG1AP05451 166 aa20.16■□□□□ 0.82
TSPAN4-217ENST00000527644 PGAM2P15259 253 aa20.16■□□□□ 0.82
TSPAN4-217ENST00000527644 PTBP1P26599 531 aaKnown RBP eCLIP20.16■□□□□ 0.82
TSPAN4-217ENST00000527644 RND3P61587 244 aa20.16■□□□□ 0.82
TSPAN4-217ENST00000527644 IL18Q14116 193 aa20.16■□□□□ 0.82
TSPAN4-217ENST00000527644 STEAP1BQ6NZ63 245 aa20.16■□□□□ 0.82
TSPAN4-217ENST00000527644 SMIM4Q8WVI0 70 aa20.16■□□□□ 0.82
TSPAN4-217ENST00000527644 B9D2Q9BPU9 175 aa20.16■□□□□ 0.82
TSPAN4-217ENST00000527644 CEPT1Q9Y6K0 416 aa20.16■□□□□ 0.82
TSPAN4-217ENST00000527644 TEX50A0A1B0GTY4 177 aa20.15■□□□□ 0.82
TSPAN4-217ENST00000527644 BMPR1BO00238 502 aa20.15■□□□□ 0.82
TSPAN4-217ENST00000527644 NDUFB8O95169 186 aa20.15■□□□□ 0.82
TSPAN4-217ENST00000527644 TRAPPC2P0DI81 140 aa20.15■□□□□ 0.82
TSPAN4-217ENST00000527644 TRAPPC2BP0DI82 140 aa20.15■□□□□ 0.82
TSPAN4-217ENST00000527644 HSD17B13Q7Z5P4 300 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-217ENST00000527644 OR4D10Q8NGI6 311 aa20.15■□□□□ 0.82
TSPAN4-217ENST00000527644 OR1L8Q8NGR8 309 aa20.15■□□□□ 0.82
TSPAN4-217ENST00000527644 TERB2Q8NHR7 220 aa20.15■□□□□ 0.82
TSPAN4-217ENST00000527644 SPNP16150 400 aa20.14■□□□□ 0.81
TSPAN4-217ENST00000527644 CD69Q07108 199 aa20.14■□□□□ 0.81
TSPAN4-217ENST00000527644 TSC22D3Q99576 134 aa20.14■□□□□ 0.81
TSPAN4-217ENST00000527644 PRNDQ9UKY0 176 aa20.14■□□□□ 0.81
TSPAN4-217ENST00000527644 IGLV11-55A0A075B6I3 123 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms