RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 TMPRSS2O15393 492 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 FCGR3BO75015 233 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 FAM87AP0C7U9 286 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 CBLN1P23435 193 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 VWC2Q2TAL6 325 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 PRAMEF5Q5TYX0 476 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 PRAMEF6Q5VXH4 476 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 MIC13Q5XKP0 118 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 TMEM144Q7Z5S9 345 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 OR4A16Q8NH70 328 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 SCO2A0A1W2PP80 73 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 SMAD7O15105 426 aaKnown RBP10.4□□□□□ -0.74
CAPN1-208ENST00000527323 SMPD2O60906 423 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 HPRT1P00492 218 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 OR9G9P0C7N8 305 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 OCC1Q8TAD7 63 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 GP6Q9HCN6 339 aa10.4□□□□□ -0.74
CAPN1-208ENST00000527323 SVEP1Q4LDE5 3571 aa10.4□□□□□ -0.75
CAPN1-208ENST00000527323 TPPP2P59282 170 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 RPP30P78346 268 aaKnown RBP10.39□□□□□ -0.75
CAPN1-208ENST00000527323 PSG7Q13046 419 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 EDDM3AQ14507 147 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 SLC35E4Q6ICL7 350 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 BAGE3Q86Y29 109 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 BAGE2Q86Y30 109 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 SSMEM1Q8WWF3 244 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 ZCCHC14Q8WYQ9 949 aaKnown RBP10.39□□□□□ -0.75
CAPN1-208ENST00000527323 TACC2O95359 2948 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 SLC17A3O00476 420 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 IGHV3-13P01766 116 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 IGHV3-7P01780 117 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 CRISP2P16562 243 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 BATFQ16520 125 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 HSD17B10Q99714 261 aaKnown RBP10.39□□□□□ -0.75
CAPN1-208ENST00000527323 DCTN5Q9BTE1 182 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 SAMD10Q9BYL1 202 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 TRBV20OR9-2A0A075B6H5 130 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 AQP7O14520 342 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 BTF3P20290 206 aaKnown RBP10.39□□□□□ -0.75
CAPN1-208ENST00000527323 GPR12P47775 334 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 TNFSF10P50591 281 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 CRYBG3Q68DQ2 2970 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 VKORC1L1Q8N0U8 176 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 COQ2Q96H96 371 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 TMEM106BQ9NUM4 274 aa10.39□□□□□ -0.75
CAPN1-208ENST00000527323 HEATR1Q9H583 2144 aaKnown RBP10.38□□□□□ -0.75
CAPN1-208ENST00000527323 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-208ENST00000527323 RRHO14718 337 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 LYZL6O75951 148 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 CXorf1O96002 111 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 CD46P15529 392 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 TDGF1P3P51864 188 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 TGFBR3Q03167 851 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 EIF4EBP1Q13541 118 aaPredicted RBP10.38□□□□□ -0.75
CAPN1-208ENST00000527323 ABHD12Q8N2K0 398 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 OR13A1Q8NGR1 328 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 DIRC2Q96SL1 478 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 HSPB9Q9BQS6 159 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 SPRR3Q9UBC9 169 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 GNG12Q9UBI6 72 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 PAM16Q9Y3D7 125 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 SPINT2O43291 252 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 TREML4Q6UXN2 200 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 RPRMLQ8N4K4 120 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 TCTEX1D1Q8N7M0 179 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 MS4A5Q9H3V2 200 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 MSL2Q9HCI7 577 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 FZR1Q9UM11 496 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 PLCE1Q9P212 2302 aa10.38□□□□□ -0.75
CAPN1-208ENST00000527323 TMEM210A6NLX4 147 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 A8MXE2 369 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 FCN1O00602 326 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 TIMP3P35625 211 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 MPV17P39210 176 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 FOXF2Q12947 444 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 TDRG1Q3Y452 100 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 PRR30Q53SZ7 412 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-208ENST00000527323 Q6ZR03 302 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 SPACA3Q8IXA5 215 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 Q8N7P7 452 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 VN1R17PQ8TDU5 208 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 RAB1CQ92928 201 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 ABHD17AQ96GS6 310 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 MRPL18Q9H0U6 180 aaKnown RBP10.37□□□□□ -0.75
CAPN1-208ENST00000527323 METRNQ9UJH8 293 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 KIR2DL5BA0A0G2JN68 375 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 KIR2DL5BA0A0G2JPC4 375 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 RAB4AP20338 218 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 IER3P46695 156 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 ERVK-16P61578 105 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 KIR2DL5AQ8N109 375 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 MYO18BQ8IUG5 2567 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 FLNCQ14315 2725 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 M0R1X1 148 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 SPINK4O60575 86 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 MPDU1O75352 247 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 SERF1AO75920 110 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 STAG3L2P0CL84 134 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 STAG3L3P0CL85 134 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 OPRK1P41145 380 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms