RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 C8orf86Q6ZUL3 223 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 NRARPQ7Z6K4 114 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 VKORC1L1Q8N0U8 176 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 CENPSQ8N2Z9 138 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 KLHL30-AS1Q8NEE0 82 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 TMEM167AQ8TBQ9 72 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 MRGPRFQ96AM1 343 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 FAM103A1Q9BTL3 118 aaKnown RBP7.92□□□□□ -1.14
VPS28-204ENST00000526054 MCRIP2Q9BUT9 160 aaKnown RBP7.92□□□□□ -1.14
VPS28-204ENST00000526054 ZNF430Q9H8G1 570 aaPredicted RBP7.92□□□□□ -1.14
VPS28-204ENST00000526054 GPR132Q9UNW8 380 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 WSB1Q9Y6I7 421 aa7.92□□□□□ -1.14
VPS28-204ENST00000526054 TEX13DA0A0J9YY54 714 aaPredicted RBP7.91□□□□□ -1.14
VPS28-204ENST00000526054 C3orf85A0A1B0GTC6 90 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 MARCH11A6NNE9 402 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 G3V318 75 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 ARPC1BO15143 372 aaKnown RBP7.91□□□□□ -1.14
VPS28-204ENST00000526054 ATG12O94817 140 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 IGHG4P01861 327 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 ELANEP08246 267 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 RPA2P15927 270 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 SLC6A1P30531 599 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 RPL8P62917 257 aaKnown RBP7.91□□□□□ -1.14
VPS28-204ENST00000526054 CFHR3Q02985 330 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 PJVKQ0ZLH3 352 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 FOXE3Q13461 319 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 ZNF585BQ52M93 769 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 PLET1Q6UQ28 207 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 C18orf65Q6ZTR6 163 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 DUSP18Q8NEJ0 188 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 SRSF12Q8WXF0 261 aaKnown RBP7.91□□□□□ -1.14
VPS28-204ENST00000526054 TMEM68Q96MH6 324 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 PHB2Q99623 299 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 B9D2Q9BPU9 175 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 SLC25A21Q9BQT8 299 aaPredicted RBP7.91□□□□□ -1.14
VPS28-204ENST00000526054 RTBDNQ9BSG5 229 aaPredicted RBP7.91□□□□□ -1.14
VPS28-204ENST00000526054 C5orf66Q9H5L9 145 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 NAA60Q9H7X0 242 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 TMEM140Q9NV12 185 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 FOXA2Q9Y261 457 aaPredicted RBP7.91□□□□□ -1.14
VPS28-204ENST00000526054 FBXO7Q9Y3I1 522 aa7.91□□□□□ -1.14
VPS28-204ENST00000526054 A0A1W2PN81 502 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 SNAPC5O75971 98 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 KRASP01116 189 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 FGF2P09038 288 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 EGR2P11161 476 aaPredicted RBP7.9□□□□□ -1.14
VPS28-204ENST00000526054 HLA-GP17693 338 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 PPIFP30405 207 aaKnown RBP7.9□□□□□ -1.14
VPS28-204ENST00000526054 BTCP35070 178 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 G6PCP35575 357 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 CHRNA7P36544 502 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 MYCNOSP40205 109 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 RPL27AP46776 148 aaKnown RBP7.9□□□□□ -1.14
VPS28-204ENST00000526054 SSBP2P81877 361 aaPredicted RBP7.9□□□□□ -1.14
VPS28-204ENST00000526054 RBMS2Q15434 407 aaKnown RBP7.9□□□□□ -1.14
VPS28-204ENST00000526054 MRGPRG-AS1Q2M3A8 158 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 AKIRIN2Q53H80 203 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 TMEM65Q6PI78 240 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 SGPP2Q8IWX5 399 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 CADM3Q8N126 398 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 LFNGQ8NES3 379 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 OR5M8Q8NGP6 311 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 TP53RKQ96S44 253 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 SPIN2AQ99865 258 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 SPIN2BQ9BPZ2 258 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 ZFP57Q9NU63 452 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 VSIG4Q9Y279 399 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 NUBP2Q9Y5Y2 271 aa7.9□□□□□ -1.14
VPS28-204ENST00000526054 MSGN1A6NI15 193 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 CRYM-AS1A6NIL9 109 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 UPK2O00526 184 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 NDUFB6O95139 128 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 TCRBP04435 133 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 OR5AC1P0C628 307 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 ANXA3P12429 323 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 SPNP16150 400 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 UCP1P25874 307 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 PSMB8P28062 276 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 CCR6P51684 374 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 AKR1C2P52895 323 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 RAB25P57735 213 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 DHODHQ02127 395 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 C19orf54Q5BKX5 351 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 H2BFWTQ7Z2G1 175 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 TMED4Q7Z7H5 227 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 ZNF695Q8IW36 515 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 RNF152Q8N8N0 203 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 RNASE11Q8TAA1 199 aaKnown RBP7.89□□□□□ -1.15
VPS28-204ENST00000526054 WWC2-AS2Q96NR7 200 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 DUX3Q96PT4 197 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 P2RX4Q99571 388 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 COMMD5Q9GZQ3 224 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 NUDT15Q9NV35 164 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 ZMAT5Q9UDW3 170 aaKnown RBP7.89□□□□□ -1.15
VPS28-204ENST00000526054 KCNIP3Q9Y2W7 256 aa7.89□□□□□ -1.15
VPS28-204ENST00000526054 PIGBOS1A0A0B4J2F0 54 aa7.88□□□□□ -1.15
VPS28-204ENST00000526054 H3BUA1 57 aa7.88□□□□□ -1.15
VPS28-204ENST00000526054 IGLV1-40P01703 118 aa7.88□□□□□ -1.15
VPS28-204ENST00000526054 RPLP1P05386 114 aaKnown RBP7.88□□□□□ -1.15
VPS28-204ENST00000526054 IL6RP08887 468 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms