RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 BSPH1Q075Z2 132 aa13.53□□□□□ -0.24
CCDC90B-203ENST00000525503 MIC13Q5XKP0 118 aa13.53□□□□□ -0.24
CCDC90B-203ENST00000525503 PATZ1Q9HBE1 687 aaKnown RBP13.53□□□□□ -0.24
CCDC90B-203ENST00000525503 SLC35D1Q9NTN3 355 aa13.53□□□□□ -0.24
CCDC90B-203ENST00000525503 FKBP11Q9NYL4 201 aa13.53□□□□□ -0.24
CCDC90B-203ENST00000525503 JKAMPQ9P055 326 aa13.53□□□□□ -0.24
CCDC90B-203ENST00000525503 SLC25A10Q9UBX3 287 aaPredicted RBP13.53□□□□□ -0.24
CCDC90B-203ENST00000525503 CNOT1A5YKK6 2376 aaKnown RBP13.53□□□□□ -0.24
CCDC90B-203ENST00000525503 UPK2O00526 184 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 MMP23AO75900 390 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 CA2P00918 260 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 PFN1P07737 140 aaKnown RBP13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 IL6RP08887 468 aaPredicted RBP13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 STAG3L2P0CL84 134 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 STAG3L3P0CL85 134 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 CT45A6P0DMU7 189 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 CT45A5P0DMU8 189 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 CT45A7P0DMV0 189 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 S100A2P29034 98 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 GALR1P47211 349 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 ATP5IP56385 69 aaPredicted RBP13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 CST9LP1Q5W188 147 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 TGIF2LYQ8IUE0 185 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 PYGO2Q9BRQ0 406 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 PLEKHA3Q9HB20 300 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 NIT2Q9NQR4 276 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 DCAF16Q9NXF7 216 aa13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 DIDO1Q9BTC0 2240 aaKnown RBP13.52□□□□□ -0.24
CCDC90B-203ENST00000525503 THBDP07204 575 aa13.52□□□□□ -0.25
CCDC90B-203ENST00000525503 RPL31P62899 125 aaKnown RBP13.52□□□□□ -0.25
CCDC90B-203ENST00000525503 PRCDQ00LT1 54 aa13.52□□□□□ -0.25
CCDC90B-203ENST00000525503 ARSJQ5FYB0 599 aaPredicted RBP13.52□□□□□ -0.25
CCDC90B-203ENST00000525503 SRD5A3Q9H8P0 318 aa13.52□□□□□ -0.25
CCDC90B-203ENST00000525503 SVILO95425 2214 aa13.52□□□□□ -0.25
CCDC90B-203ENST00000525503 J3QR06 171 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 PPP1R2P9O14990 202 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 TRGC1P0CF51 173 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 ARL14EPLP0DKL9 152 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 UBE2G2P60604 165 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 B2MP61769 119 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 CTAG1AP78358 180 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 SPNS3Q6ZMD2 512 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 ZNF833PQ6ZTB9 187 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 FRZBQ92765 325 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 HINT2Q9BX68 163 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 SAP30LQ9HAJ7 183 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 GAR1Q9NY12 217 aaKnown RBP13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 ZNF835Q9Y2P0 537 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 PPIAL4EA0A075B759 164 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 PPIAL4DF5H284 164 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 PPIAL4FP0DN26 164 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 SRP14P37108 136 aaKnown RBP13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 RPL29P47914 159 aaKnown RBP13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 RHOBP62745 196 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 Q8NA96 180 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 OR51G1Q8NGK1 321 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 ABHD5Q8WTS1 349 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 SNRNP40Q96DI7 357 aaKnown RBP13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 C1orf159Q96HA4 380 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 ZNF714Q96N38 554 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 BET1LQ9NYM9 111 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 PPIAL4AQ9Y536 164 aa13.51□□□□□ -0.25
CCDC90B-203ENST00000525503 TMEM178BH3BS89 294 aa13.5□□□□□ -0.25
CCDC90B-203ENST00000525503 APOA2P02652 100 aa13.5□□□□□ -0.25
CCDC90B-203ENST00000525503 NPPCP23582 126 aa13.5□□□□□ -0.25
CCDC90B-203ENST00000525503 ATP5G3P48201 142 aa13.5□□□□□ -0.25
CCDC90B-203ENST00000525503 GNB1P62873 340 aa13.5□□□□□ -0.25
CCDC90B-203ENST00000525503 OSR1Q8TAX0 266 aaPredicted RBP13.5□□□□□ -0.25
CCDC90B-203ENST00000525503 SSMEM1Q8WWF3 244 aa13.5□□□□□ -0.25
CCDC90B-203ENST00000525503 NEUROG1Q92886 237 aa13.5□□□□□ -0.25
CCDC90B-203ENST00000525503 NGBQ9NPG2 151 aa13.5□□□□□ -0.25
CCDC90B-203ENST00000525503 MT-CO2P00403 227 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 CD99P14209 185 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 STPG3Q8N7X2 389 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 NECAP1Q8NC96 275 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 OR5B3Q8NH48 314 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 BOD1L1Q8NFC6 3051 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 DOCK11Q5JSL3 2073 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 DSCAMO60469 2012 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 RAI1Q7Z5J4 1906 aaPredicted RBP13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 IFITM10A6NMD0 228 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 PPP5D1E7EU14 171 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 PHOX2AO14813 284 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 NDUFB4O95168 129 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 IGKV1-16P04430 117 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 FABP1P07148 127 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 KCNIP4Q6PIL6 250 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 TMEM204Q9BSN7 226 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 OR51M1Q9H341 326 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 SH3BGRL2Q9UJC5 107 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 CADP27708 2225 aa13.49□□□□□ -0.25
CCDC90B-203ENST00000525503 HCFC1P51610 2035 aa13.48□□□□□ -0.25
CCDC90B-203ENST00000525503 TEX50A0A1B0GTY4 177 aa13.48□□□□□ -0.25
CCDC90B-203ENST00000525503 MYOD1P15172 320 aa13.48□□□□□ -0.25
CCDC90B-203ENST00000525503 EFNB3Q15768 340 aa13.48□□□□□ -0.25
CCDC90B-203ENST00000525503 LRRC10Q5BKY1 277 aa13.48□□□□□ -0.25
CCDC90B-203ENST00000525503 ASCL5Q7RTU5 278 aa13.48□□□□□ -0.25
CCDC90B-203ENST00000525503 HIST3H2BBQ8N257 126 aa13.48□□□□□ -0.25
CCDC90B-203ENST00000525503 MRPL20Q9BYC9 149 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms