RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.21□□□□□ -1.74
CD44-218ENST00000525469 RBM45Q8IUH3 476 aaKnown RBP4.21□□□□□ -1.74
CD44-218ENST00000525469 FAM219AQ8IW50 185 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 FBXL14Q8N1E6 418 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 SLC22A24Q8N4F4 322 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 TMEM251Q8N6I4 163 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 KCNG3Q8TAE7 436 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 MARCH1Q8TCQ1 289 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 SCGB1C1Q8TD33 95 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 TMEM37Q8WXS4 190 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 POM121L2Q96KW2 1035 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 GPER1Q99527 375 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 ATP5SQ99766 215 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 HSPB9Q9BQS6 159 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 RTBDNQ9BSG5 229 aaPredicted RBP4.21□□□□□ -1.74
CD44-218ENST00000525469 TMEM204Q9BSN7 226 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 MS4A6AQ9H2W1 248 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 WDR76Q9H967 626 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 PATZ1Q9HBE1 687 aaKnown RBP4.21□□□□□ -1.74
CD44-218ENST00000525469 MRPL16Q9NX20 251 aaKnown RBP4.21□□□□□ -1.74
CD44-218ENST00000525469 EHFQ9NZC4 300 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 C1RLQ9NZP8 487 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 RABAC1Q9UI14 185 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 MRM2Q9UI43 246 aaKnown RBP4.21□□□□□ -1.74
CD44-218ENST00000525469 HHLA2Q9UM44 414 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 ZNF443Q9Y2A4 671 aaPredicted RBP4.21□□□□□ -1.74
CD44-218ENST00000525469 TIMM9Q9Y5J7 89 aa4.21□□□□□ -1.74
CD44-218ENST00000525469 MEGF8Q7Z7M0 2845 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 A0A0G2JMM0 328 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 CENPVL1A0A0U1RR11 272 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 A0A1W2PPB8 328 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 LRP5LA4QPB2 252 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 PINLYPA6NC86 204 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 MEIS3P1A6NDR6 274 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 CRYM-AS1A6NIL9 109 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 KIR3DP1A8MWS1 328 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 C17orf105B2RV13 164 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 G3V3Y1 287 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 DEGS1O15121 323 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 LMX1BO60663 402 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 HLA-DQA2P01906 255 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 P04436 131 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 KLK1P06870 262 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 LIPFP07098 398 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 IGLC1P0CG04 106 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 GNB3P16520 340 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 PMCHP20382 165 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 KITLGP21583 273 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 USF1P22415 310 aaPredicted RBP4.2□□□□□ -1.74
CD44-218ENST00000525469 AADACP22760 399 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 NPY1RP25929 384 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 GDF1P27539 372 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 GRPRP30550 384 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 PPP1CCP36873 323 aaKnown RBP4.2□□□□□ -1.74
CD44-218ENST00000525469 TFPI2P48307 235 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 RAB9AP51151 201 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 ZNF133P52736 654 aaPredicted RBP4.2□□□□□ -1.74
CD44-218ENST00000525469 TCTAP57738 103 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 PLP1P60201 277 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 HBG1P69891 147 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 HBG2P69892 147 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 HIST1H1AQ02539 215 aaPredicted RBP4.2□□□□□ -1.74
CD44-218ENST00000525469 P2RY6Q15077 328 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 TMEM249Q2WGJ8 235 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 CST9LP1Q5W188 147 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 ZNF562Q6V9R5 426 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 SEM1Q6ZVN7 128 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 H1FNTQ75WM6 255 aaPredicted RBP4.2□□□□□ -1.74
CD44-218ENST00000525469 C16orf82Q7Z2V1 217 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 CALHM1Q8IU99 346 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 OR4N5Q8IXE1 308 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 ZNF440Q8IYI8 595 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 SELENOHQ8IZQ5 122 aaKnown RBP4.2□□□□□ -1.74
CD44-218ENST00000525469 RFLNBQ8N5W9 214 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 LINC01555Q8NAE3 123 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 SCCPDHQ8NBX0 429 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 OR10G3Q8NGC4 313 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 OR52E2Q8NGJ4 325 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 OR51A4Q8NGJ6 313 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 ZNF480Q8WV37 535 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 RAB8BQ92930 207 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 IL22RA2Q969J5 263 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 C4orf45Q96LM5 186 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 TRIB1Q96RU8 372 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 RSG1Q9BU20 258 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 GNB1LQ9BYB4 327 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 ULBP2Q9BZM5 246 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 C5orf66Q9H5L9 145 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 G6PC2Q9NQR9 355 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 CENPMQ9NSP4 180 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 DEPPQ9NTK1 212 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 JKAMPQ9P055 326 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 KCNS2Q9ULS6 477 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 LSM5Q9Y4Y9 91 aaKnown RBP4.2□□□□□ -1.74
CD44-218ENST00000525469 ZNF780BQ9Y6R6 833 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 LY96Q9Y6Y9 160 aa4.2□□□□□ -1.74
CD44-218ENST00000525469 SVEP1Q4LDE5 3571 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 MDFIC2A0A1B0GVS7 189 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 FEZF1A0PJY2 475 aa4.19□□□□□ -1.74
CD44-218ENST00000525469 PSMB11A5LHX3 300 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms