RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 ZNF256Q9Y2P7 627 aaPredicted RBP13.48□□□□□ -0.25
NR1H3-228ENST00000525441 TRBV9A0A0B4J1U6 114 aa13.47□□□□□ -0.25
NR1H3-228ENST00000525441 TEX22C9J3V5 150 aa13.47□□□□□ -0.25
NR1H3-228ENST00000525441 UPK2O00526 184 aa13.47□□□□□ -0.25
NR1H3-228ENST00000525441 S1PR2O95136 353 aa13.47□□□□□ -0.25
NR1H3-228ENST00000525441 DHFRP00374 187 aa13.47□□□□□ -0.25
NR1H3-228ENST00000525441 FGF2P09038 288 aa13.47□□□□□ -0.25
NR1H3-228ENST00000525441 TBPP20226 339 aa13.47□□□□□ -0.25
NR1H3-228ENST00000525441 DEFA5Q01523 94 aa13.47□□□□□ -0.25
NR1H3-228ENST00000525441 RNASE12Q5GAN4 147 aaKnown RBP13.47□□□□□ -0.25
NR1H3-228ENST00000525441 FAM209BQ5JX69 171 aa13.47□□□□□ -0.25
NR1H3-228ENST00000525441 LINC00299Q6ZSB3 139 aa13.47□□□□□ -0.25
NR1H3-228ENST00000525441 COMMD5Q9GZQ3 224 aa13.47□□□□□ -0.25
NR1H3-228ENST00000525441 AKIP1Q9NQ31 210 aa13.47□□□□□ -0.25
NR1H3-228ENST00000525441 TMEM140Q9NV12 185 aa13.47□□□□□ -0.25
NR1H3-228ENST00000525441 LY86O95711 162 aa13.46□□□□□ -0.25
NR1H3-228ENST00000525441 PRH1P02810 166 aa13.46□□□□□ -0.25
NR1H3-228ENST00000525441 S100A5P33763 92 aa13.46□□□□□ -0.25
NR1H3-228ENST00000525441 UCP3P55916 312 aa13.46□□□□□ -0.25
NR1H3-228ENST00000525441 ZNF45Q02386 682 aa13.46□□□□□ -0.25
NR1H3-228ENST00000525441 EXOSC2Q13868 293 aaKnown RBP13.46□□□□□ -0.25
NR1H3-228ENST00000525441 TATDN3Q17R31 274 aa13.46□□□□□ -0.25
NR1H3-228ENST00000525441 PHLDA2Q53GA4 152 aa13.46□□□□□ -0.25
NR1H3-228ENST00000525441 RNASE10Q5GAN6 216 aaKnown RBP13.46□□□□□ -0.25
NR1H3-228ENST00000525441 SLC38A6Q8IZM9 456 aa13.46□□□□□ -0.25
NR1H3-228ENST00000525441 OR52I2Q8NH67 350 aa13.46□□□□□ -0.25
NR1H3-228ENST00000525441 FCAMRQ8WWV6 532 aa13.46□□□□□ -0.25
NR1H3-228ENST00000525441 PRR25Q96S07 402 aa13.46□□□□□ -0.25
NR1H3-228ENST00000525441 KLK11Q9UBX7 282 aa13.46□□□□□ -0.25
NR1H3-228ENST00000525441 MTFP1Q9UDX5 166 aa13.46□□□□□ -0.25
NR1H3-228ENST00000525441 MARCH11A6NNE9 402 aa13.45□□□□□ -0.26
NR1H3-228ENST00000525441 M0QYG6 137 aa13.45□□□□□ -0.26
NR1H3-228ENST00000525441 PSMB6P28072 239 aa13.45□□□□□ -0.26
NR1H3-228ENST00000525441 TNFSF8P32971 234 aa13.45□□□□□ -0.26
NR1H3-228ENST00000525441 LPAR6P43657 344 aa13.45□□□□□ -0.26
NR1H3-228ENST00000525441 MRPS10P82664 201 aaKnown RBP13.45□□□□□ -0.26
NR1H3-228ENST00000525441 KLF5Q13887 457 aaPredicted RBP13.45□□□□□ -0.26
NR1H3-228ENST00000525441 RPEL1Q2QD12 228 aa13.45□□□□□ -0.26
NR1H3-228ENST00000525441 ABHD1Q96SE0 405 aa13.45□□□□□ -0.26
NR1H3-228ENST00000525441 SRSF8Q9BRL6 282 aaKnown RBP13.45□□□□□ -0.26
NR1H3-228ENST00000525441 RSRP1Q9BUV0 290 aa13.45□□□□□ -0.26
NR1H3-228ENST00000525441 FAM212BQ9NTI7 297 aaPredicted RBP13.45□□□□□ -0.26
NR1H3-228ENST00000525441 RABL2AQ9UBK7 228 aaPredicted RBP13.45□□□□□ -0.26
NR1H3-228ENST00000525441 RABL2BQ9UNT1 228 aa13.45□□□□□ -0.26
NR1H3-228ENST00000525441 SORL1Q92673 2214 aa13.45□□□□□ -0.26
NR1H3-228ENST00000525441 E7EUB6 86 aa13.44□□□□□ -0.26
NR1H3-228ENST00000525441 RBMXL2O75526 392 aaKnown RBP13.44□□□□□ -0.26
NR1H3-228ENST00000525441 OR2J3O76001 311 aa13.44□□□□□ -0.26
NR1H3-228ENST00000525441 CRYGCP07315 174 aa13.44□□□□□ -0.26
NR1H3-228ENST00000525441 AREGP15514 252 aa13.44□□□□□ -0.26
NR1H3-228ENST00000525441 HIST1H1BP16401 226 aaKnown RBP13.44□□□□□ -0.26
NR1H3-228ENST00000525441 OR2B8PP59922 312 aa13.44□□□□□ -0.26
NR1H3-228ENST00000525441 C15orf32Q32M92 178 aa13.44□□□□□ -0.26
NR1H3-228ENST00000525441 THOC7Q6I9Y2 204 aaKnown RBP13.44□□□□□ -0.26
NR1H3-228ENST00000525441 CADM3Q8N126 398 aa13.44□□□□□ -0.26
NR1H3-228ENST00000525441 ARRDC1Q8N5I2 433 aa13.44□□□□□ -0.26
NR1H3-228ENST00000525441 DIRAS2Q96HU8 199 aa13.44□□□□□ -0.26
NR1H3-228ENST00000525441 FBXL7Q9UJT9 491 aa13.44□□□□□ -0.26
NR1H3-228ENST00000525441 TRAV3A0A0B4J244 114 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 A0A1B0GW64 132 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 GABARAPH6UMI1 98 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 SNAPC5O75971 98 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 CD3DP04234 171 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 DEFA4P12838 97 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 MYOD1P15172 320 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 RPA2P15927 270 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 ETV6P41212 452 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 SYNJ2BPP57105 145 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 TAS2R19P59542 299 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 SSBP1Q04837 148 aaKnown RBP13.43□□□□□ -0.26
NR1H3-228ENST00000525441 CD69Q07108 199 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 TBC1D26Q86UD7 250 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 CCDC190Q86UF4 302 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 TMEM229BQ8NBD8 167 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 OR9G4Q8NGQ1 327 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 B9D2Q9BPU9 175 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 SOSTQ9BQB4 213 aa13.43□□□□□ -0.26
NR1H3-228ENST00000525441 QTRT1Q9BXR0 403 aaKnown RBP13.43□□□□□ -0.26
NR1H3-228ENST00000525441 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.42□□□□□ -0.26
NR1H3-228ENST00000525441 KRASP01116 189 aa13.42□□□□□ -0.26
NR1H3-228ENST00000525441 TRBV12-3P01733 135 aa13.42□□□□□ -0.26
NR1H3-228ENST00000525441 PGAM2P15259 253 aa13.42□□□□□ -0.26
NR1H3-228ENST00000525441 CTRB1P17538 263 aa13.42□□□□□ -0.26
NR1H3-228ENST00000525441 ZNF585BQ52M93 769 aa13.42□□□□□ -0.26
NR1H3-228ENST00000525441 CTRB2Q6GPI1 263 aa13.42□□□□□ -0.26
NR1H3-228ENST00000525441 HSD17B13Q7Z5P4 300 aaPredicted RBP13.42□□□□□ -0.26
NR1H3-228ENST00000525441 OR1L8Q8NGR8 309 aa13.42□□□□□ -0.26
NR1H3-228ENST00000525441 ZNF486Q96H40 463 aaPredicted RBP13.42□□□□□ -0.26
NR1H3-228ENST00000525441 TSC22D3Q99576 134 aa13.42□□□□□ -0.26
NR1H3-228ENST00000525441 LSM4Q9Y4Z0 139 aaKnown RBP13.42□□□□□ -0.26
NR1H3-228ENST00000525441 CYB5BO43169 146 aa13.41□□□□□ -0.26
NR1H3-228ENST00000525441 TRAPPC2P0DI81 140 aa13.41□□□□□ -0.26
NR1H3-228ENST00000525441 TRAPPC2BP0DI82 140 aa13.41□□□□□ -0.26
NR1H3-228ENST00000525441 PTBP1P26599 531 aaKnown RBP eCLIP13.41□□□□□ -0.26
NR1H3-228ENST00000525441 G6PCP35575 357 aa13.41□□□□□ -0.26
NR1H3-228ENST00000525441 KLK9Q2XQG4 91 aa13.41□□□□□ -0.26
NR1H3-228ENST00000525441 FANCD2OSQ96PS1 177 aa13.41□□□□□ -0.26
NR1H3-228ENST00000525441 KLK9Q9UKQ9 250 aa13.41□□□□□ -0.26
NR1H3-228ENST00000525441 PRNDQ9UKY0 176 aa13.41□□□□□ -0.26
NR1H3-228ENST00000525441 IGLC7A0M8Q6 106 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms